Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq876 95.1 2e-14 seq202 91.5 3e-13 seq258 89.7 1e-12 >seq876 Length=1913211 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| |||||||| | || | ||||| |||| || || ||| ||||||||| Sbjct 665935 ATACCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCA 665994 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||||| |||||||| || | || || || || || Sbjct 665995 GCAAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGG 666054 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || |||||| || || || ||||| || || || Sbjct 666055 GGAATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCTATAGTGTCAGAGCTCTCC 666114 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | || || | |||||||||||| Sbjct 666115 ACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCAT 666164 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || |||||||| | || | || | |||| |||||| ||| || || || Sbjct 530180 ATCCCTCCCCTAAGACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCG 530121 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | || || | ||||| ||||| ||||| | ||||| ||||| ||| Sbjct 530120 GAGAGCGTTCGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGT 530061 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| ||||| || |||||| || || || || | ||| || || Sbjct 530060 GGGATTCCTTCCTTATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCC 530001 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || || | || || | |||||||||||| Sbjct 530000 ACGTCAAGGGTTATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 529951 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | ||||| ||||| ||||| | ||||| ||||| || ||||| || |||| Sbjct 665552 CATCCTCAAGCTGTTTTCCAGCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTT 665611 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || || || ||| || | ||||| || || || ||||| | Sbjct 665612 TGTCCTGAATCTTTGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGA 665671 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | ||||| ||||| | |||||| | |||||||||||| Sbjct 665672 TAGTTTTCCCAGTAAGTGTTTTCACAAATATCTGCAT 665708 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| |||||||| | || | |||| |||| || || |||||| |||||| Sbjct 666391 ATCCCACCCCTAAGACGAAGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCA 666450 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || | || || || |||||||| | ||||||||||| || Sbjct 666451 GCAAGGGTTCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGC 666510 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || ||||| ||| || || || || | ||| || || Sbjct 666511 GGGATGCCCTCCTTGTCCTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCC 666570 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || || || | ||||| | || |||||||| Sbjct 666571 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTGACGAAGATCTGCAT 666620 >seq202 Length=4793652 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | ||| | ||||| || || ||||| || || Sbjct 4329350 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 4329291 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || ||||||||||| || | | ||| || || ||| Sbjct 4329290 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 4329231 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| || ||||| |||| || || || Sbjct 4329230 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 4329171 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | ||||| | |||||||||||| Sbjct 4329170 ACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 4329121 >seq258 Length=1945713 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || |||||||| | ||| | ||| || || || ||||| | | Sbjct 1660558 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 1660499 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| || || ||||| |||||||| || || | |||||||||||||| Sbjct 1660498 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 1660439 Query 192430 ATTCCTTCTTTATCTTG 192446 || ||||| || || || Sbjct 1660438 ATGCCTTCCTTGTCCTG 1660422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983350018778400