Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq876 95.1 2e-14
seq202 91.5 3e-13
seq258 89.7 1e-12
>seq876
Length=1913211
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| |||||||| | || | ||||| |||| || || ||| |||||||||
Sbjct 665935 ATACCACCCCTAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCA 665994
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | ||||| |||||||| || | || || || || ||
Sbjct 665995 GCAAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGG 666054
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || |||||| || || || ||||| || || ||
Sbjct 666055 GGAATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCTATAGTGTCAGAGCTCTCC 666114
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || ||||| | || || | ||||||||||||
Sbjct 666115 ACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCAT 666164
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| || || |||||||| | || | || | |||| |||||| ||| || || ||
Sbjct 530180 ATCCCTCCCCTAAGACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCG 530121
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||||| | || || | ||||| ||||| ||||| | ||||| ||||| |||
Sbjct 530120 GAGAGCGTTCGGCCGTCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGATCCGGT 530061
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| |||||||| ||||| || |||||| || || || || | ||| || ||
Sbjct 530060 GGGATTCCTTCCTTATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCC 530001
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || || || || || | || || | ||||||||||||
Sbjct 530000 ACGTCAAGGGTTATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 529951
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| || | ||||| ||||| ||||| | ||||| ||||| || ||||| || ||||
Sbjct 665552 CATCCTCAAGCTGTTTTCCAGCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTT 665611
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || || || || || ||| || | ||||| || || || ||||| |
Sbjct 665612 TGTCCTGAATCTTTGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGA 665671
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| ||||| ||||| | |||||| | ||||||||||||
Sbjct 665672 TAGTTTTCCCAGTAAGTGTTTTCACAAATATCTGCAT 665708
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| |||||||| | || | |||| |||| || || |||||| ||||||
Sbjct 666391 ATCCCACCCCTAAGACGAAGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCA 666450
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | ||||| |||| || | || || || |||||||| | ||||||||||| ||
Sbjct 666451 GCAAGGGTTCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGC 666510
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || ||||| ||| || || || || | ||| || ||
Sbjct 666511 GGGATGCCCTCCTTGTCCTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCC 666570
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| || || || | ||||| | || ||||||||
Sbjct 666571 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTGACGAAGATCTGCAT 666620
>seq202
Length=4793652
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||| | || | ||| | ||||| || || ||||| || ||
Sbjct 4329350 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 4329291
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| || | || ||||||||||| || | | ||| || || |||
Sbjct 4329290 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 4329231
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || |||||||| |||||| || ||||| |||| || || ||
Sbjct 4329230 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 4329171
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || || || || ||||| | ||||| | ||||||||||||
Sbjct 4329170 ACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 4329121
>seq258
Length=1945713
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||||||||| | || |||||||| | ||| | ||| || || || ||||| | |
Sbjct 1660558 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 1660499
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || || |||| || || ||||| |||||||| || || | ||||||||||||||
Sbjct 1660498 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 1660439
Query 192430 ATTCCTTCTTTATCTTG 192446
|| ||||| || || ||
Sbjct 1660438 ATGCCTTCCTTGTCCTG 1660422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983350018778400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |