Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq202 109 1e-18 seq258 91.5 3e-13 >seq202 Length=4793652 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || || ||||| || || | ||| | |||| ||| || ||| ||||||||| Sbjct 4328799 ATACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCT 4328740 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | || || | || || |||||||||||||| ||||| ||||| || Sbjct 4328739 GCAAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGA 4328680 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || || || ||||| ||| || || || || Sbjct 4328679 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCA 4328620 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || || |||||||||| || || | || |||||||| Sbjct 4328619 ACTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCAT 4328570 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | || | ||| | ||||| || || |||||| || || Sbjct 4329350 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 4329291 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | || || | || |||||||||||||| | | ||| ||||| ||| Sbjct 4329290 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 4329231 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || |||||||| |||||| || ||||| ||||| || || || Sbjct 4329230 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 4329171 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || ||||| | ||||| | ||||||||||| Sbjct 4329170 ACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 4329121 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| |||||| ||| ||||| || | || | || | || || | ||||| ||| Sbjct 4082854 GTAGACTCTTTCTGAATGTTATAGTCAGCCAAGGTGCGGCCATCCTCAAGCTGTTTCCCA 4082795 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 |||||||| || ||||| ||||| || || |||||||| ||||| || || || || Sbjct 4082794 GCAAAAATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTATCCTGGATCTTGGCCTTG 4082735 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || || || ||||| || ||| || || || ||||| || || || || | || Sbjct 4082734 ACGTTGTCAATGGTATCAGAACTTTCGACCTCAAGTGTAATTGTCTTGCCTGTAAGGGTC 4082675 Query 172053 TTAATGAATATCTGCAT 172069 |||| || |||||||| Sbjct 4082674 TTAACAAAAATCTGCAT 4082658 >seq258 Length=1945713 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 |||| | ||||||||||| | || |||||||| | ||| | ||| || ||| || | Sbjct 1660566 TCATTGTTCCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGT 1660507 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||||| ||| | || | || || || ||||| ||||||||||| || | ||||| | Sbjct 1660506 AATCTGCTAAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGTTGTTGAT 1660447 Query 171955 CAGGTGGTATTCCTTCTTTATCTTG 171979 ||||||| || ||||| || || || Sbjct 1660446 CAGGTGGAATGCCTTCCTTGTCCTG 1660422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904122428707200