Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 102 2e-16 >seq2 Length=81761211 Score = 102 bits (112), Expect = 2e-16 Identities = 285/427 (67%), Gaps = 13/427 (3%) Strand=Plus/Plus Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| ||| ||| |||||||| || |||| || || || |||||||| ||||||||| Sbjct 31018786 TTTCCTTCAAAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCA 31018845 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 || || || ||| ||||| | ||| || || ||||||||||||||||| ||| Sbjct 31018846 TT--CCCCCCTCCAAT-ACCCG--TTCCTCGTTGCCTT-CCAACAGCATCAATTTCATCA 31018899 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108 | ||| | | ||| || | ||| | | | || ||| ||| | || | || || | Sbjct 31018900 ACGAATACAATACAAGGTGCATTCTCTTTAGCCTTCTTGAAAAGA--TCACGAACCCGTG 31018957 Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167 | || |||| ||||||| |||| || ||||| ||||| | || | | || | || | Sbjct 31018958 AGGCGCCAACACCAACAAACATCTCCACAAACTCAGATCCTGAGA-TAGAGAAAAAGGGA 31019016 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227 ||| ||||| || || | ||| | || || || ||||| || || ||||| || || Sbjct 31019017 ACACCAGCTTCACCAGCAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCA 31019076 Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287 | ||||| || || |||| || || ||| || | | || || |||| Sbjct 31019077 ATGAGAAGAACACCTTTAGGTATACGAGCACCGACAGCAGTAAACCTTTCTGGTTTCTTA 31019136 Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCA 289347 | ||| || || | |||| | || | ||||| |||||| || || |||||| || Sbjct 31019137 AGAAACTCCACTACTTCCATGAAATCCTGCTTTGCTTCATCAACCCCAGCAACATCATCA 31019196 Query 289348 AAAGTAA 289354 ||||||| Sbjct 31019197 AAAGTAA 31019203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470128255117808