Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq876 89.7 4e-13
>seq876
Length=1913211
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614
||||| ||||| ||||| || | || ||||| ||||| ||| |||| |||| |||
Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 666333
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || ||| | | ||||| ||||| ||||| || ||| | ||| ||||||
Sbjct 666332 -GACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCA 666274
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| || || | ||| || || || || ||||| | | ||| | || || || ||
Sbjct 666273 GCAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAA 666214
Query 107735 CATTCAAAAGGAGTCTAC 107752
|||||||||||||| ||
Sbjct 666213 TATTCAAAAGGAGTCCAC 666196
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || ||||||||||| | || ||||| |||||||| |||| |||| |
Sbjct 530406 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTCTCGACGTGGAGAGTTC 530465
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || ||| || || ||| || || ||||| ||| | || ||| ||
Sbjct 530466 CGACACCATCGAAATCGTTAAGTCAAAAATCCAGGACAAAGAGGGCATCCCACCGGACCA 530525
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||||| | |||| || || |||||||| ||||||| | ||| | | ||||||||
Sbjct 530526 GCAGAGGTTGATTTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 530585
Query 107735 CATTCAAAAGGAGTCTAC 107752
||| || || ||||| ||
Sbjct 530586 CATCCAGAAAGAGTCGAC 530603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398441304315376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |