Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq876 89.7 4e-13 >seq876 Length=1913211 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| ||||| ||||| || | || ||||| ||||| ||| |||| |||| ||| Sbjct 666392 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 666333 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | ||||| ||||| ||||| || ||| | ||| |||||| Sbjct 666332 -GACACCATCGACAACGTAAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCA 666274 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| || || || || ||||| | | ||| | || || || || Sbjct 666273 GCAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAA 666214 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 666213 TATTCAAAAGGAGTCCAC 666196 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||||||||| | || ||||| |||||||| |||| |||| | Sbjct 530406 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTCTCGACGTGGAGAGTTC 530465 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| || || ||| || || ||||| ||| | || ||| || Sbjct 530466 CGACACCATCGAAATCGTTAAGTCAAAAATCCAGGACAAAGAGGGCATCCCACCGGACCA 530525 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| || || |||||||| ||||||| | ||| | | |||||||| Sbjct 530526 GCAGAGGTTGATTTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 530585 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| || || ||||| || Sbjct 530586 CATCCAGAAAGAGTCGAC 530603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398441304315376