Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq258 96.9 5e-15 seq202 87.8 3e-12 >seq258 Length=1945713 Score = 96.9 bits (106), Expect = 5e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || |||||||||||||| ||||||||| | | |||||||| || ||||| ||||| ||| Sbjct 1660428 AAGGAAGGCATTCCACCTGATCAACAACGTTTGATTTTTGCTGGGAAACAGTTAGAAGAT 1660487 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATT 146242 | | || ||| ||||||| || || || || || || ||| |||||||||| || Sbjct 1660488 GGTCGGACCTTAGCAGATTACAACATTCAGAAGGAGTCAACTCTCCATTTAGTTTT 1660543 >seq202 Length=4793652 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | ||||| | || ||||| ||||| || |||| || || || Sbjct 4329122 TGCAGATATTTGTGAAAACCCTCACTGGAAAGACAATCACACTTGAAGTTGAGAGCTCCG 4329181 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || |||||| ||| ||| || || |||||||| || || | Sbjct 4329182 ACACTATTGACAATGTTAAGGCTAAAATCCAAGATAAGGAGGGGATTCCACCGGACCAGC 4329241 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| ||||| || | || ||| | | || | | || || |||| Sbjct 4329242 AGCGCCTCATTTTTGCTGGTAAGCAGCTTGAGGATGGTCGCACCCTTGCGGACTACAATA 4329301 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| ||| | ||| Sbjct 4329302 TTCAGAAGGAATCTACTCTTCAT 4329324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785286050865280