Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 98.7 4e-16
seq513 86.0 2e-12
seq2 84.2 8e-12
>seq89584
Length=148959
Score = 98.7 bits (108), Expect = 4e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||
Sbjct 38215 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 38274
Query 50170 CTGCTCTACTCCGC 50183
||||||||||||||
Sbjct 38275 CTGCTCTACTCCGC 38288
>seq513
Length=923960
Score = 86.0 bits (94), Expect = 2e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 50115 GGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCT 50174
|||| | ||||||||||||| | |||||||| |||||||| |||||||||| |||||||
Sbjct 370172 GGAGACAGGATTTGAACCCGTGACCTCCAGGTCATGAGCCTTGCGAGCTACCAAACTGCT 370113
Query 50175 CTACTCCGCA 50184
||||||| ||
Sbjct 370112 CTACTCCACA 370103
Score = 82.4 bits (90), Expect = 3e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170
|||||||| ||| ||||||||| | |||| ||| ||||||||| || ||||||| |||
Sbjct 367866 TTGCGGAGATAGGACTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCAAGCTACCAAAC 367925
Query 50171 TGCTCTACTCCGC 50183
|||||||||||||
Sbjct 367926 TGCTCTACTCCGC 367938
>seq2
Length=81761211
Score = 84.2 bits (92), Expect = 8e-12
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| | ||||||||||||| | || | ||| ||||| ||| |||||||||| ||
Sbjct 40804023 GTTGCGGAGACAGGATTTGAACCCGTGACCCCAAGGTTATGAACCTTGCGAGCTACCAAA 40803964
Query 50170 CTGCTCTACTC 50180
|||||||||||
Sbjct 40803963 CTGCTCTACTC 40803953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181410008699808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |