Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq229 84.2 3e-11 >seq229 Length=1198050 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 192993 CGTATACCTGAAATAGGGGATAAATTTTGTT-CGGGAATGGCCCAAAAAGGAACTTGTGG 193051 ||||| ||| | || || ||||||||| || | || |||| | |||| |||||| ||| Sbjct 109892 CGTATTCCTCAGATTGGAGATAAATTTAGTAGCAGGCATGGTC-AAAAGGGAACTGTTGG 109950 Query 193052 TATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTAT 193111 ||||| |||| | || ||||||||||||| || | ||| || || |||||||| Sbjct 109951 TATGACTTATACTCAGGAAGATATGCCATGGACTGTTGAAGGCATTACGCCTGATATTAT 110010 Query 193112 TATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTAT 193159 | | |||||| || ||||| || | ||||| || |||| |||| Sbjct 110011 TGTGAATCCACATGCCATTCCCTCTCGGATGACTATCGGTCAACTTAT 110058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627827370762240