Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq36 143 4e-29
seq403 127 3e-24
seq468 111 2e-19
seq293 100 4e-16
>seq36
Length=6822877
Score = 143 bits (158), Expect = 4e-29
Identities = 406/619 (66%), Gaps = 11/619 (2%)
Strand=Plus/Plus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
|| || |||||||| || ||||||||||| | | ||| | ||||| ||||| |||||
Sbjct 1783603 CACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAGA 1783662
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAA 39735
||||||||||| || | ||| || ||||| || ||||| ||| ||| ||||| |||||
Sbjct 1783663 CCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGC-GCAGAAACTACCAGAGAAGAA 1783721
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATG 39792
|||||| || || |||||||||| || || |||| | || | ||| |
Sbjct 1783722 GATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAA---GAATCGGAGGCGTC 1783778
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
||||| | ||||| | || || || || || | || || |||||||
Sbjct 1783779 GATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATG 1783838
Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||||| | ||| || | ||||| | || || || | | ||| || |||||
Sbjct 1783839 GAAGAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACAT 1783898
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
|| || ||||||||||| || || ||||||||||| || ||| | || || | |
Sbjct 1783899 CTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAG 1783958
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
|||||||| || | | || | || || || ||||| || ||||||
Sbjct 1783959 CTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGC 1784018
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089
|| || || | || || | | |||| ||| |||| || | ||| ||||||
Sbjct 1784019 GAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCA 1784078
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
|| || ||||| || | ||| |||||||| |||||||| || || || || || ||
Sbjct 1784079 GTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTT 1784138
Query 40150 TTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209
|||||||| | ||| || | | | || | || ||||| || || | | |||||
Sbjct 1784139 CTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACATGCAGAAGCGGTCAGGATT 1784198
Query 40210 TTTTGCAAGGATGGGTTCC 40228
| ||||||| ||| |||
Sbjct 1784199 TGGAGCAAGGAGGGGCTCC 1784217
>seq403
Length=1478721
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
||| || ||||| ||||| |||||||| || ||||||||||| || | |||||
Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238
Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109
||| |||| ||| || || || ||||| | |||||| ||||| || || | ||||||
Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATTATGAATCCCTATAGCAACTCTCATCAA 384178
Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169
||||||||| || | ||| ||| ||| | || ||| || || || || | || ||
Sbjct 384177 CATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGAG 384118
Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
||||||||| ||||| || | || ||||||||| || ||||| ||
Sbjct 384117 AGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070
Score = 105 bits (116), Expect = 9e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809
|||||| ||||| | || | ||||| | ||| | || | ||||| |||| | |||
Sbjct 384849 TCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGTAGCATTGGAACTACACC 384790
Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869
||| || |||||| || ||| |||| ||||| || | || ||||| || ||| ||
Sbjct 384789 ATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCACGAATGTTGTGAATGGA 384730
Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929
| ||| ||||| || || ||| |||| ||| || |||||| || ||||||||
Sbjct 384729 GACACCAATTCCGCCAGCAGATTTGCTTATTATAGCGCACTCTTTCAAGGTATCATATAT 384670
Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972
|| || |||||||||||| ||||| || || || ||||||
Sbjct 384669 TCCTTCAATGCTATCATCTTTCATGCAAATGAGGAAGCAGCTA 384627
>seq468
Length=902046
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| || ||||| | |||| || |||| |||| | || | || ||| |||| ||| |||
Sbjct 790168 CCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCCA 790109
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|| ||| | ||||| |||||| |||||||||||| | || ||||| ||| || |||
Sbjct 790108 TTCGATGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGAG 790049
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
| ||| |||||||| || || || | || || |||| ||| ||||||||
Sbjct 790048 ACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATATC 789989
Query 69931 CCCTCTATGCTATCATCTATCATG 69954
|| || |||||||||||| |||||
Sbjct 789988 CCATCAATGCTATCATCTTTCATG 789965
Score = 105 bits (116), Expect = 9e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
|||||| ||||||| | ||| || | | || |||||||||||| |||| |||| ||
Sbjct 791675 CTCTTTCTCATATTTTAGATACAGTCTCACAAAGTCATCTCCCCAACAATCAGCCAAACC 791616
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
|||| || ||||| || | |||||||| | |||| | | |||| || ||| ||
Sbjct 791615 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTTTGGACTCTTTCCATGAA 791556
Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659
|||||||||||||| || || ||| |||||||||| ||||| ||| ||
Sbjct 791555 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 791505
>seq293
Length=413263
Score = 100 bits (110), Expect = 4e-16
Identities = 365/562 (65%), Gaps = 17/562 (3%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||| || ||||| || || || ||||| || | | || | ||||||||||| |||||
Sbjct 227098 GCAAGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAG 227039
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734
|| ||||| | ||| ||||| |||||||| || ||||| ||| ||| | || || ||||
Sbjct 227038 ACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGC-GCAGAAGCTGCCGGAGAAGA 226980
Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTAT 39791
| || ||||| || ||||| || | || || | ||| | || || ||| |
Sbjct 226979 AAATACCTTCGACGCACGCAAAAGCGAGAA-TC-CGCTCAGCAA-ATGATTCAGAGGCGT 226923
Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851
||||| | ||||||| | ||| || || || || | ||||| || ||
Sbjct 226922 CAATCCAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGC 226863
Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||| |||| |||||| || || | || || || | | ||||||||||
Sbjct 226862 GAAAAAGATTGGATTTTTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATACA 226803
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || || || |||||||| || || ||||| || || || ||| | || || | ||
Sbjct 226802 TCTCGGAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGCGCGCGCCTCCGGAA 226743
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
||| |||||| || | | | || | || || ||| || |||||| |||||
Sbjct 226742 GTTGAACCTCTCGCATGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCATCAGAAGCGG 226683
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC--GGGTGTCAATTTATTCCA 40089
| || || |||| || | | ||||| | || || |||| | | |||
Sbjct 226682 CGAAGAAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGGTGTGATCC- 226624
Query 40090 GTCATTG----ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145
||||| | |||| ||| | ||| || ||||| || ||||| || || |||||||
Sbjct 226623 --CATTGCCGAACGTCTTGTGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGGCCTCTG 226566
Query 40146 CCTTTTTGTACATGTTCCATAT 40167
| || |||||||| | ||| ||
Sbjct 226565 CTTTCTTGTACATCTCCCAAAT 226544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686139599525760
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