Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq36 143 4e-29 seq403 127 3e-24 seq468 111 2e-19 seq293 100 4e-16 >seq36 Length=6822877 Score = 143 bits (158), Expect = 4e-29 Identities = 406/619 (66%), Gaps = 11/619 (2%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || |||||||| || ||||||||||| | | ||| | ||||| ||||| ||||| Sbjct 1783603 CACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAGA 1783662 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAA 39735 ||||||||||| || | ||| || ||||| || ||||| ||| ||| ||||| ||||| Sbjct 1783663 CCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGC-GCAGAAACTACCAGAGAAGAA 1783721 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATG 39792 |||||| || || |||||||||| || || |||| | || | ||| | Sbjct 1783722 GATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAA---GAATCGGAGGCGTC 1783778 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | ||||| | || || || || || | || || ||||||| Sbjct 1783779 GATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATG 1783838 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 ||||| | ||| || | ||||| | || || || | | ||| || ||||| Sbjct 1783839 GAAGAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACAT 1783898 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 || || ||||||||||| || || ||||||||||| || ||| | || || | | Sbjct 1783899 CTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAG 1783958 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 |||||||| || | | || | || || || ||||| || |||||| Sbjct 1783959 CTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGC 1784018 Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089 || || || | || || | | |||| ||| |||| || | ||| |||||| Sbjct 1784019 GAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCA 1784078 Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149 || || ||||| || | ||| |||||||| |||||||| || || || || || || Sbjct 1784079 GTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTT 1784138 Query 40150 TTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209 |||||||| | ||| || | | | || | || ||||| || || | | ||||| Sbjct 1784139 CTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACATGCAGAAGCGGTCAGGATT 1784198 Query 40210 TTTTGCAAGGATGGGTTCC 40228 | ||||||| ||| ||| Sbjct 1784199 TGGAGCAAGGAGGGGCTCC 1784217 >seq403 Length=1478721 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| ||||| |||||||| || ||||||||||| || | ||||| Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||| |||| ||| || || || ||||| | |||||| ||||| || || | |||||| Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATTATGAATCCCTATAGCAACTCTCATCAA 384178 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||||||||| || | ||| ||| ||| | || ||| || || || || | || || Sbjct 384177 CATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGAG 384118 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||||||| ||||| || | || ||||||||| || ||||| || Sbjct 384117 AGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070 Score = 105 bits (116), Expect = 9e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | ||||| | ||| | || | ||||| |||| | ||| Sbjct 384849 TCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGTAGCATTGGAACTACACC 384790 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| || |||||| || ||| |||| ||||| || | || ||||| || ||| || Sbjct 384789 ATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCACGAATGTTGTGAATGGA 384730 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| ||||| || || ||| |||| ||| || |||||| || |||||||| Sbjct 384729 GACACCAATTCCGCCAGCAGATTTGCTTATTATAGCGCACTCTTTCAAGGTATCATATAT 384670 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| ||||| || || || |||||| Sbjct 384669 TCCTTCAATGCTATCATCTTTCATGCAAATGAGGAAGCAGCTA 384627 >seq468 Length=902046 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || || ||||| | |||| || |||| |||| | || | || ||| |||| ||| ||| Sbjct 790168 CCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCCA 790109 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || ||| | ||||| |||||| |||||||||||| | || ||||| ||| || ||| Sbjct 790108 TTCGATGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGAG 790049 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || || || | || || |||| ||| |||||||| Sbjct 790048 ACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATATC 789989 Query 69931 CCCTCTATGCTATCATCTATCATG 69954 || || |||||||||||| ||||| Sbjct 789988 CCATCAATGCTATCATCTTTCATG 789965 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||| ||||||| | ||| || | | || |||||||||||| |||| |||| || Sbjct 791675 CTCTTTCTCATATTTTAGATACAGTCTCACAAAGTCATCTCCCCAACAATCAGCCAAACC 791616 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||| || ||||| || | |||||||| | |||| | | |||| || ||| || Sbjct 791615 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTTTGGACTCTTTCCATGAA 791556 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||||||||||| || || ||| |||||||||| ||||| ||| || Sbjct 791555 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 791505 >seq293 Length=413263 Score = 100 bits (110), Expect = 4e-16 Identities = 365/562 (65%), Gaps = 17/562 (3%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || || || ||||| || | | || | ||||||||||| ||||| Sbjct 227098 GCAAGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAG 227039 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734 || ||||| | ||| ||||| |||||||| || ||||| ||| ||| | || || |||| Sbjct 227038 ACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGC-GCAGAAGCTGCCGGAGAAGA 226980 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA---TTAT 39791 | || ||||| || ||||| || | || || | ||| | || || ||| | Sbjct 226979 AAATACCTTCGACGCACGCAAAAGCGAGAA-TC-CGCTCAGCAA-ATGATTCAGAGGCGT 226923 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | ||||||| | ||| || || || || | ||||| || || Sbjct 226922 CAATCCAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGC 226863 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||| |||| |||||| || || | || || || | | |||||||||| Sbjct 226862 GAAAAAGATTGGATTTTTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATACA 226803 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || || || |||||||| || || ||||| || || || ||| | || || | || Sbjct 226802 TCTCGGAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGCGCGCGCCTCCGGAA 226743 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 ||| |||||| || | | | || | || || ||| || |||||| ||||| Sbjct 226742 GTTGAACCTCTCGCATGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCATCAGAAGCGG 226683 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC--GGGTGTCAATTTATTCCA 40089 | || || |||| || | | ||||| | || || |||| | | ||| Sbjct 226682 CGAAGAAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGGTGTGATCC- 226624 Query 40090 GTCATTG----ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145 ||||| | |||| ||| | ||| || ||||| || ||||| || || ||||||| Sbjct 226623 --CATTGCCGAACGTCTTGTGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGGCCTCTG 226566 Query 40146 CCTTTTTGTACATGTTCCATAT 40167 | || |||||||| | ||| || Sbjct 226565 CTTTCTTGTACATCTCCCAAAT 226544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686139599525760