Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq293 132 4e-26 >seq293 Length=413263 Score = 132 bits (146), Expect = 4e-26 Identities = 258/374 (69%), Gaps = 8/374 (2%) Strand=Plus/Plus Query 43912 GCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 || ||| |||||| | || || || || ||| ||||| || || || ||||| ||||| Sbjct 226729 GCGAGAGGTTCAACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGCCATCGAAAA 226788 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAA 44031 ||||| || || ||||| |||||||| | || || |||||||| || ||| || Sbjct 226789 CATTCACTCCGAGATGTATAGTCTTCTCCTCGAGACCTACATCAAGGACTCCACCGAAAA 226848 Query 44032 GCATCGATTGTTTAATGCG--ATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTG 44088 ||| | | ||| ||| || ||||| ||||| |||| | | ||| || | || Sbjct 226849 --ATCCAATCTTTTTCGCGCCATCGAAACCGTACCCTGCG-TCGCCCGTAAGGCTCAGTG 226905 Query 44089 GGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGT 44148 ||| || ||||| | | ||| || |||| || || || |||| ||||| Sbjct 226906 GGCACTGCGCTGGATTGACGCCTCTGAATCATTTGCTGAGCGGATTCTCGCTTTTGCGTG 226965 Query 44149 TGTGGAAGGCATTTTCTTTTCAGG-ATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAG 44207 || ||||| |||||||| || || | | | |||| |||| || ||| | ||||| || | Sbjct 226966 CGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCG-CCATCTTCTGGCTCAAGAAGCGCG 227024 Query 44208 GTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATT 44267 |||||||||| || | || ||||| || ||| | || |||||| || || | || | Sbjct 227025 GTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACT 227084 Query 44268 GCGATTTTGCTTGC 44281 |||| ||||||||| Sbjct 227085 GCGACTTTGCTTGC 227098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397022055551920