Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq202 96.9 3e-15 seq876 91.5 1e-13 >seq202 Length=4793652 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || |||||||||||||| | | |||| | || || ||||| ||||| Sbjct 4329317 GTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTGCTTACCA 4329258 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || ||||||| ||||| || ||||| || | ||||| ||||| ||| || || Sbjct 4329257 GCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCTTGGATTTTAGCCTTA 4329198 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | | |||||||| || || || | || || || || ||| Sbjct 4329197 ACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTT 4329138 Query 27231 TTCACAAAGATTTGCATAGCT 27251 |||||||| || |||||| || Sbjct 4329137 TTCACAAATATCTGCATACCT 4329117 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || || || || || |||| | || ||||||||||| ||| Sbjct 4329545 GTCGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCCTCGAGCTGTTTGCCG 4329486 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||| ||||| || || | ||||| ||||| ||||| ||| Sbjct 4329485 GCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTC 4329426 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | ||| || || || || || | || || || ||||| Sbjct 4329425 ACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTC 4329366 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||||||||| Sbjct 4329365 TTCACAAAGATTTGCAT 4329349 >seq876 Length=1913211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||| || | | |||| | || || |||||||| || Sbjct 665512 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCA 665571 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| | ||| ||||| ||||| | |||||||| || ||||| ||| Sbjct 665572 GCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTC 665631 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| || || || ||||| |||| ||| || || || ||| Sbjct 665632 ACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTAAGTGTT 665691 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| || |||||| Sbjct 665692 TTCACAAATATCTGCATA 665709 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||| | | | || |||| ||||||||||| ||| Sbjct 530603 GTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCG 530544 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| | | ||| || ||||| || | |||||||| || ||| || || Sbjct 530543 GCGAAAATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTA 530484 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | |||| | ||||| | || || || ||||| || | ||||| || || ||| Sbjct 530483 ACGATTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTT 530424 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 530423 TTGACAAAGATCTGCAT 530407 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || |||||||||||||| || | |||| | || || || || || || Sbjct 665740 GTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTGCTTGCCA 665799 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || || || || || || || | ||||| || || ||| ||| |||| Sbjct 665800 GCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCTTTC 665859 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||| || | | || || || || || |||| ||| ||||| || || Sbjct 665860 ACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTCCCCGTAAGTGTC 665919 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| || |||||| Sbjct 665920 TTCACAAATATCTGCATA 665937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424470454497408