Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq202 96.9 3e-15
seq876 91.5 1e-13
>seq202
Length=4793652
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || |||||||||||||| | | |||| | || || ||||| |||||
Sbjct 4329317 GTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTGCTTACCA 4329258
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| ||||||| ||||| || ||||| || | ||||| ||||| ||| || ||
Sbjct 4329257 GCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCTTGGATTTTAGCCTTA 4329198
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | |||||| | | |||||||| || || || | || || || || |||
Sbjct 4329197 ACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTT 4329138
Query 27231 TTCACAAAGATTTGCATAGCT 27251
|||||||| || |||||| ||
Sbjct 4329137 TTCACAAATATCTGCATACCT 4329117
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || || || || || |||| | || ||||||||||| |||
Sbjct 4329545 GTCGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCCTCGAGCTGTTTGCCG 4329486
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | ||||||||||| ||||| || || | ||||| ||||| ||||| |||
Sbjct 4329485 GCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTC 4329426
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | || || | | ||| || || || || || | || || || |||||
Sbjct 4329425 ACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCTTTCCAGTAAGAGTC 4329366
Query 27231 TTCACAAAGATTTGCAT 27247
|||||||||||||||||
Sbjct 4329365 TTCACAAAGATTTGCAT 4329349
>seq876
Length=1913211
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || ||||| ||||| || | | |||| | || || |||||||| ||
Sbjct 665512 GTGGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGTTTTCCA 665571
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| | ||| ||||| ||||| | |||||||| || ||||| |||
Sbjct 665572 GCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCTTTGTCCTGAATCTTTGCCTTC 665631
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||||| || || || ||||| |||| ||| || || || |||
Sbjct 665632 ACGTTATCAATTGTGTCTGAACTCTCCACCTCAAGAGTGATAGTTTTCCCAGTAAGTGTT 665691
Query 27231 TTCACAAAGATTTGCATA 27248
|||||||| || ||||||
Sbjct 665692 TTCACAAATATCTGCATA 665709
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || ||||||||| | | | || |||| ||||||||||| |||
Sbjct 530603 GTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGTTTTCCG 530544
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| |||| | | ||| || ||||| || | |||||||| || ||| || ||
Sbjct 530543 GCGAAAATCAACCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTA 530484
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | |||| | ||||| | || || || ||||| || | ||||| || || |||
Sbjct 530483 ACGATTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTT 530424
Query 27231 TTCACAAAGATTTGCAT 27247
|| |||||||| |||||
Sbjct 530423 TTGACAAAGATCTGCAT 530407
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || |||||||||||||| || | |||| | || || || || || ||
Sbjct 665740 GTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGTTGCTTGCCA 665799
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || || || || || || || | ||||| || || ||| ||| ||||
Sbjct 665800 GCAAAGATCAGCCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCTTTC 665859
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||| || | | || || || || || |||| ||| ||||| || ||
Sbjct 665860 ACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGTTTTCCCCGTAAGTGTC 665919
Query 27231 TTCACAAAGATTTGCATA 27248
|||||||| || ||||||
Sbjct 665920 TTCACAAATATCTGCATA 665937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424470454497408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |