Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq293 95.1 4e-14 >seq293 Length=413263 Score = 95.1 bits (104), Expect = 4e-14 Identities = 117/156 (75%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 443716 TCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 |||||||||| ||| |||||||| | || || ||||||||| || |||||||||| Sbjct 226953 TCGCTTTTGC-GTGCGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCG-CCATCTTCTG 227010 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | | || ||||| || | |||| ||||| || ||| |||||| || ||| ||| || Sbjct 227011 GCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGA 227070 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTA 443870 |||||| | || |||||||| || || ||||| || Sbjct 227071 CGAGGGACTCCACTGCGACTTTGCTTGCCTTCTGTA 227106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1586512915880880