Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq89584 540 1e-148
seq64191 215 6e-51
seq374 205 1e-47
seq2 205 1e-47
>seq89584
Length=148959
Score = 540 bits (598), Expect = 1e-148
Identities = 717/993 (72%), Gaps = 2/993 (0%)
Strand=Plus/Minus
Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172
|| ||| | ||| | |||| ||| | ||| | ||||| | || ||||||||||| |
Sbjct 1137 TTCTGCAACTGGATTACCAGTACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1078
Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACC 176231
||||| || | | | || || | | ||| |||||| |||| || ||||| || ||
Sbjct 1077 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATCATTGCCTTCATTGCTGCCCC 1019
Query 176232 ACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAA 176291
|| |||||||| || |||||||| ||||| || | || |||||||| |||||||||||
Sbjct 1018 TCCAGTCGATATTGATGGTATTCGTGAACCTGTTTCTGGGTCTCTACTTTATGGAAACAA 959
Query 176292 CATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAAT 176351
|| |||||||| || | | || | || || || || | || || ||||||||
Sbjct 958 TATTATCTCAGGTGCCATTATTCCTACTTCCGCAGCTATAGGTTTGCATTTTTACCCAAT 899
Query 176352 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411
|||||||||||| | ||||| || ||| | |||||||| || || || |||| ||||
Sbjct 898 ATGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTTATTGT 839
Query 176412 ATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACAG 176471
| ||||| | | ||| | | ||||||||| || | ||||||||||||| | |
Sbjct 838 TCTACACTTTTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 779
Query 176472 ACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGC 176531
|| || ||||| |||||||| ||||||||| || || || || | || || | ||
Sbjct 778 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACAGC 719
Query 176532 AGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCAT 176591
|||||| | |||| || | ||||||||| ||||||||||||||||||| | || ||
Sbjct 718 TGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 659
Query 176592 TTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCC 176651
|| ||||| |||||||| ||| |||||||||| ||||||||||||||||| ||||| ||
Sbjct 658 ATCTGGTACTTTCAACTTCATGATTGTATTCCAGGCAGAGCACAACATTCTTATGCATCC 599
Query 176652 ATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGG 176711
||| || ||| | || ||||| ||||| || || || || || ||| || ||||| ||
Sbjct 598 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 539
Query 176712 AAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGG 176771
| | || |||||| | | || || || || ||||| || || || | ||
Sbjct 538 TTCTTTGGTAACTTCTAGTTTAATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAAGG 479
Query 176772 TTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGG 176831
||||| ||| || ||||| ||||| || || || |||||||| || || ||||| |||||
Sbjct 478 TTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGG 419
Query 176832 TCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGC 176891
|| | |||||||| |||||| |||||| || || | | || |||||| | ||
Sbjct 418 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGC 359
Query 176892 AGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAA 176951
|| | || || || | |||||||| ||||| ||||| || | || ||||| |||||
Sbjct 358 TGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTGGGTATTAGTACTATGGCGTTCAA 299
Query 176952 CCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTAC 177011
| | |||||||| || || ||||| || || | || | | ||| || ||| ||
Sbjct 298 CTTGAACGGTTTTAATTTTAACCAATCCGTAGTTGATAGCCAAGGTCGTGTTATTAACAC 239
Query 177012 ATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGC 177071
|||| |||||| | || ||||| || |||||||||||||| ||||| || ||||||||
Sbjct 238 TTGGGCTGATATCATAAATCGTGCTAATCTTGGTATGGAAGTAATGCATGAACGTAATGC 179
Query 177072 TCACAACTTCCCACTTGACCTTGCTGCTGCAGA 177104
||||||||||| || || || ||| ||| |||
Sbjct 178 ACACAACTTCCCTCTAGATCTAGCTTCTGTAGA 146
>seq64191
Length=168564
Score = 215 bits (238), Expect = 6e-51
Identities = 308/434 (71%), Gaps = 0/434 (0%)
Strand=Plus/Plus
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
|||||| |||| || ||||| || | || | |||||| || |||||||| ||||| ||
Sbjct 58649 TTTATCATTGCCTTCATTGCTGCCTCTCCAGCCGATATTGATGGTATTCGTGAACCTGTT 58708
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
| || |||||||| ||||||||||| || |||||| | | | | || | ||
Sbjct 58709 TCTGGGTCTCTACTTTATGGAAACAATATTATCTCAAGTGTCATTATTCCTACTTCCGCA 58768
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || | || || |||||||| ||||||| || | | ||||| || ||| | |||
Sbjct 58769 GCTATAGGTTTGCATTTTTACCCAATATGGGAAGTAGAATCTGTTGATGAGTGGTTATAC 58828
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
|| || || || |||| |||| | |||| | | ||| | | |||||||
Sbjct 58829 AACAACGGTCCTTATGAACTTATTGTTCTATACTTTTTACTTGGTGTAGCTTGTTACATG 58888
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||||||||||| | | || || ||| | |||||||| |||||||||
Sbjct 58889 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGTGCCCTTGGATTGCTGTTGCATAT 58948
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | || || | | |||| | | |||| || | || |||||| |
Sbjct 58949 TCAGCTCCTGTTGCGGCTGCTACAACTGTTTACTTGATCTACCCTATTGGCCAAGGAAGT 59008
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|||||||||||||||||| | || || || |||| |||||||| ||| |||||| |||
Sbjct 59009 TTCTCTGATGGTATGCCTTTAGGAATATCTGGTAATTTCAACTTCATGATTGTATGCCAG 59068
Query 176626 GCAGAGCACAACAT 176639
|||||||||||||
Sbjct 59069 TCAGAGCACAACAT 59082
>seq374
Length=1248919
Score = 205 bits (226), Expect = 1e-47
Identities = 266/368 (72%), Gaps = 0/368 (0%)
Strand=Plus/Plus
Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796
|| || || || ||||| || || || | ||||||| ||| || ||||| |||||
Sbjct 600828 AGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAA 600887
Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856
|| || || |||||||| || || ||||| ||||| || | |||||||| |||||| |
Sbjct 600888 ACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 600947
Query 176857 TTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGG 176916
||||| || || | | || |||||| | || || | || || || | ||||||
Sbjct 600948 TTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGG 601007
Query 176917 TTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 176976
|| ||||| ||||| || | || ||||| |||||| | |||||||| || || |||||
Sbjct 601008 TTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAA 601067
Query 176977 TCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCA 177036
|| || | || | | ||| || ||| || |||| |||||| | || |||||
Sbjct 601068 TCCGTAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCT 601127
Query 177037 AACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCT 177096
|| |||||||||||||| ||||| || |||||||| ||||||||||| || || || |||
Sbjct 601128 AATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCT 601187
Query 177097 GCTGCAGA 177104
||| |||
Sbjct 601188 TCTGTAGA 601195
>seq2
Length=81761211
Score = 205 bits (226), Expect = 1e-47
Identities = 266/368 (72%), Gaps = 0/368 (0%)
Strand=Plus/Plus
Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796
|| || || || ||||| || || || | ||||||| ||| || ||||| |||||
Sbjct 48005822 AGGGAAACCACTGAAAATGAGTCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAA 48005881
Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856
|| || || |||||||| || || ||||| ||||| || | |||||||| |||||| |
Sbjct 48005882 ACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 48005941
Query 176857 TTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGG 176916
||||| || || | | || |||||| | || || | || || || | ||||||
Sbjct 48005942 TTCAACAATTCCCGTTCCTTGCATTTCTTCTTGGCTGCTTGGCCTGTAGTGGGTATCTGG 48006001
Query 176917 TTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAG 176976
|| ||||| ||||| || | || ||||| |||||| | |||||||| || || |||||
Sbjct 48006002 TTCACTGCTTTGGGTATTAGTACTATGGCGTTCAACTTGAACGGTTTTAATTTTAACCAA 48006061
Query 176977 TCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCA 177036
|| || | || | | ||| || ||| || |||| |||||| | || |||||
Sbjct 48006062 TCCGTAGTTGATAGCCAAGGTCGTGTTATTAACACTTGGGCTGATATCATAAATCGTGCT 48006121
Query 177037 AACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCT 177096
|| |||||||||||||| ||||| || |||||||| ||||||||||| || || || |||
Sbjct 48006122 AATCTTGGTATGGAAGTAATGCATGAACGTAATGCACACAACTTCCCTCTAGATCTAGCT 48006181
Query 177097 GCTGCAGA 177104
||| |||
Sbjct 48006182 TCTGTAGA 48006189
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 176344 TACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAA 176403
||| |||| ||||||||| || | |||| || ||| | |||||||| || || || ||
Sbjct 22128483 TACTCAATATGGGAAGCAACATCTATTGATGAGTGGTTATACAATGGCGGTCCTTATGAA 22128542
Query 176404 CTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTT 176463
| |||| | ||||| | || ||| | | ||||||||| || | |||||||||
Sbjct 22128543 ATTATTGTTCTACACTTTTTAATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTT 22128602
Query 176464 AGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGT 176516
|||| | | || |||| |||||||| ||||||||| || || || ||
Sbjct 22128603 AGTTTCCATCAGGGTATGCACCCTTGGATTGTTGTTGCATATTCAGCTCCTGT 22128655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602818606970880
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