Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq876 86.0 4e-12 >seq876 Length=1913211 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||||| | || || || || | Sbjct 530406 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTCTCGACGTGGAGAGTTC 530465 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 |||| || | ||||| | | |||||| | |||||||| || | || ||| Sbjct 530466 CGACACCATCGA-AATCGTTAAGTCAAAAA-TCCAGGACAAAGAGGGCATCCCACCGGAC 530523 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 ||||| |||| ||||| ||||||||||| | || |||| || | | | ||||| ||| Sbjct 530524 CAGCAGAGGTTGATTTTCGCCGGAAAACAGCTCGAGGACGGCCGAACCCTCTCCGACTAC 530583 Query 27967 AACATCCAAAAAGAG 27981 |||||||| |||||| Sbjct 530584 AACATCCAGAAAGAG 530598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355473867652368