Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq640 104 2e-17 seq876 89.7 4e-13 >seq640 Length=221176 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| |||||||| || || || |||| |||||||| || || ||||| Sbjct 161981 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCAGCAAAG 162040 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || | |||||||| || | || | || ||| |||||| || ||| ||| | ||| Sbjct 162041 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAA-CGTT 162099 Query 39214 GCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | ||| || |||||||| || | ||||| | || ||||| || ||||| || Sbjct 162100 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGAC 162159 Query 39273 AAAGATTTGCATCTTT 39288 ||||||||||||||| Sbjct 162160 GAAGATTTGCATCTTT 162175 >seq876 Length=1913211 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/225 (70%), Gaps = 9/225 (4%) Strand=Plus/Plus Query 39066 TAAG-CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124 |||| || | ||| | |||||| || || || || || |||||||| ||||| || | Sbjct 665945 TAAGACGAAGCACGAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTAC 666004 Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184 | | || ||||||||||| || |||||||| || | |||||||| | ||| | || || Sbjct 666005 GGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGGGGAATGCCCT 666064 Query 39185 CTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCC 39240 | |||||| |||||| || | ||| | | | || || ||| |||||| || Sbjct 666065 CCTTGTCCTGGATTTTAGCCTTCA-CGTTGTCTATAGTGTCAGAGCT---CTCCACCTCA 666120 Query 39241 ACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | ||||| | ||||| || || || || ||||| || |||||| Sbjct 666121 AGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCATC 666165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429076619966192