Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq36 163 4e-35
seq293 159 5e-34
seq468 122 1e-22
seq403 109 8e-19
>seq36
Length=6822877
Score = 163 bits (180), Expect = 4e-35
Identities = 384/579 (66%), Gaps = 3/579 (1%)
Strand=Plus/Plus
Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199
||| ||||| ||||| || || || ||||| | | ||| | ||||| ||||| |||||
Sbjct 1783602 ACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAG 1783661
Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259
||| |||||||| || | || || ||||| || || || |||| ||||| |||||
Sbjct 1783662 ACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGCGCAGAAACTACCAGAGAAGAA 1783721
Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTAT 48319
||||| || ||| |||||||| || || |||| | || | | || ||
Sbjct 1783722 GATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAAGAATCGGAGGCGTCGAT 1783781
Query 48320 CCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379
||| || | ||||| | ||||| || || || | || || ||||||| ||
Sbjct 1783782 CCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATGGAA 1783841
Query 48380 GAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTC 48439
||| ||| || | ||||| | ||| || || | | || || ||||| ||
Sbjct 1783842 GAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACATCTC 1783901
Query 48440 GGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTG 48499
|||||| || ||||| || || ||||||||||| || ||| | ||| || | || |||
Sbjct 1783902 GGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAGCTG 1783961
Query 48500 TACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAA 48559
||||||| || || |||| | ||||| || ||||| || ||| || ||
Sbjct 1783962 TACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGCGAA 1784021
Query 48560 AAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG---TTTATTCCAGTC 48616
|| || | || || | | |||| ||||| ||| || || || ||||||||
Sbjct 1784022 GAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCAGTG 1784081
Query 48617 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTT 48676
|| ||||| || | ||| |||||||| |||||||| || || || || ||||| ||
Sbjct 1784082 GCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTTCTT 1784141
Query 48677 ATACATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715
||||| | ||| || | | ||| |||| || || ||
Sbjct 1784142 GTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACAT 1784180
>seq293
Length=413263
Score = 159 bits (176), Expect = 5e-34
Identities = 571/881 (65%), Gaps = 25/881 (3%)
Strand=Plus/Minus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|| ||||| || || || | ||||| || |||||||| || || | || || || |
Sbjct 227388 TTCTGATACTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTACCCTGCAGCGAGATGAGT 227329
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| ||||||||||||| | || ||| || || | | | || | || ||
Sbjct 227328 TCCATCCAATCAAATGGATTCGATACACCATACATCTTGTCATAGCCCAGAGCTCCAACA 227269
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029
|| | |||||| |||||||| ||||| | |||| | || ||||| || | |||
Sbjct 227268 AGCCGATCTGCCACGAATTCAATATAGCGGCTCATTAGATCTGCGTTCATCCCCACAAGA 227209
Query 48030 TTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATC 48089
|| || || || || ||| || | ||| ||| |||||||| | | |||
Sbjct 227208 GCGCAGGGGAGTGCATCACAAACAAATTCCTTTTCAATATCTACAGCATCGGCAACAATC 227149
Query 48090 GATGTTACCGTTTCCTC----ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGC 48145
||| | ||||| | | || ||| || | | || ||| | || ||
Sbjct 227148 TCCCGAACCCTCTCCTCCGAAATCTTGTTGAT----CAGAAGGCTATACAGAAGGCAAGC 227093
Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205
||| || || || || || || || | | || | ||||||||||| |||||||| ||
Sbjct 227092 AAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCTGG 227033
Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATATGC 48264
||| | || || || |||||||| || | || ||| ||| | || || ||||| || |
Sbjct 227032 CATCAAACCGCGCTTCTTGAGCCAGAAGA-TGGCGCAGAAGCTGCCGGAGAAGAAAATAC 226974
Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--ATCCA 48322
|||| ||| |||||| ||| || || | ||| | || || | | | || |||||
Sbjct 226973 CTTCGACGCACGCAAAAGCGAGAA-TC-CGCTCAGCAAATGATTCAGAGGCGTCAATCCA 226916
Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382
|| ||||||| | |||||| || || || | ||||| || || ||| ||
Sbjct 226915 GCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGAAAAAG 226856
Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442
| | |||||| || || || | ||| || || | | |||||||||||| |||||
Sbjct 226855 ATTGGATTTTTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATACATCTCGGA 226796
Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502
|||||| ||||| || || ||||| || || || ||| | ||| || | | || ||
Sbjct 226795 GTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGCGCGCGCCTCCGGAAGTTGAAC 226736
Query 48503 CTC-CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561
||| || | || ||| | || | ||||| || || |||||| ||| || || |
Sbjct 226735 CTCTCGCA-TGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCATCAGAAGCGGCGAAGA 226677
Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA--GTTTATTCCAGTCATT 48619
| || | || | | ||||| | |||| || || | || | ||| ||||
Sbjct 226676 AGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGGTGTGATCC---CATT 226620
Query 48620 G----ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTT 48675
| | |||| ||| | ||| || ||||| || ||||| || || ||||||||||| |
Sbjct 226619 GCCGAACGTCTTGTGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGGCCTCTGCTTTCT 226560
Query 48676 TATACATATTCCATATATCACTGTATTGGATTGGGAAAATA 48716
| ||||| | ||| || | | ||| |||| ||||| |||
Sbjct 226559 TGTACATCTCCCAAATCTGAGGGTAGCGGATCGGGAACATA 226519
>seq468
Length=902046
Score = 122 bits (134), Expect = 1e-22
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217
||| || ||||| | ||||| ||||||| |||| |||| | |||||| |||| ||| ||
Sbjct 790169 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 790110
Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277
|| ||||||||||| |||||| |||||||||||| | || ||||| ||| || ||
Sbjct 790109 ATTCGATGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 790050
Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337
| || |||||||| || ||| ||| | ||||| |||| |||||| || ||
Sbjct 790049 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATAT 789990
Query 78338 ACCCTCTATACTGTCATCCATCATG 78362
|| || || || ||||| |||||
Sbjct 789989 CCCATCAATGCTATCATCTTTCATG 789965
Score = 100 bits (110), Expect = 4e-16
Identities = 127/172 (74%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956
|||| | ||||||| ||| || | |||| |||||||||||| |||| |||| ||
Sbjct 791675 CTCTTTCTCATATTTTAGATACAGTCTCACAAAGTCATCTCCCCAACAATCAGCCAAACC 791616
Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAA 78015
||| || |||||||| | |||||||| || ||| | | || |||| || ||| |
Sbjct 791615 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCAT-TACTTTGGACTCTTTCCATGA 791557
Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067
| ||||| || |||||||| ||| ||| ||||||| || ||||||||| ||
Sbjct 791556 AAAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 791505
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| |||||||| || | ||| ||||| || || ||||||||| | ||| | | ||
Sbjct 789176 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 789117
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
||||||| || || || | || || || ||||| || || || || | ||||||
Sbjct 789116 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 789057
Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577
||| || ||||| ||||| | ||| | | |||||| | ||| ||| || |
Sbjct 789056 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 788997
Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625
||||| ||||||||||| | ||| ||| || || || || |||||
Sbjct 788996 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 788949
>seq403
Length=1478721
Score = 109 bits (120), Expect = 8e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| |||||||| ||||| || ||||| ||||| || ||||| || | ||||
Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCA 78516
||| |||| ||| || || || || || |||| |||||| |||| || || | |||||
Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 384179
Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576
|||||||||| || ||||| ||| || | || ||| || | || || | || |
Sbjct 384178 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 384119
Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625
||||||||||||||| || | || ||||||||| || ||||| ||
Sbjct 384118 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693890909877760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |