Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07]
89,584 sequences; 1,064,200,343 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq36 143 4e-29
seq468 113 6e-20
seq403 109 8e-19
>seq36
Length=6822877
Score = 143 bits (158), Expect = 4e-29
Identities = 382/582 (66%), Gaps = 9/582 (2%)
Strand=Plus/Plus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
||| ||||| ||||| || ||||| ||||| | | ||| | ||||| ||||| |||||
Sbjct 1783602 ACACGCAAAGTCACAGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTGGAAAAAGTGAG 1783661
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
||||||||||| || | ||| || ||||| || || || |||| ||||| |||||
Sbjct 1783662 ACCAGGCATTAGCCCTCTCTTCTTCAGCCAGAAGATGGCGCAGAAACTACCAGAGAAGAA 1783721
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC---ATTATG 46805
||||| || || || ||||| | || || |||| | || | ||| |
Sbjct 1783722 GATGCCCTCAACGCAAGCAAATGCAAGAATTCGCTCTGCAAAA---GAATCGGAGGCGTC 1783778
Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865
||||| | ||||||| | ||||| || || || | || || |||||||
Sbjct 1783779 GATCCAGCGGAGAGCCCACTGTGCCTTGCGGGCGACGCAGGGAACGGTCTCGATAGCATG 1783838
Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925
||||| ||| || | ||||| | || || || | | || || |||||
Sbjct 1783839 GAAGAGGTGCGATTTCTCTGCGGAGTCTTTGATGTAGGTTTCGAGAAGCAGGCTGTACAT 1783898
Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985
|| || || |||||||| || || ||||||||||| || ||| | || || | |
Sbjct 1783899 CTCGGAGTGGATGTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAG 1783958
Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGC 47045
||||||||| || || ||| | ||||| || ||||| || ||| ||
Sbjct 1783959 CTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGC 1784018
Query 47046 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAG---TTTATTCCA 47102
|| || || | || || | | |||| ||| |||| || || || ||||||
Sbjct 1784019 GAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCA 1784078
Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162
|| || ||||| || | ||| |||||||| ||||||||||| || || || |||||
Sbjct 1784079 GTGGCGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTT 1784138
Query 47163 TTTATACATATTCCATATATCACGATATTGGATCGGAAAAAT 47204
|| ||||| | ||| || | | | || |||||||||| ||
Sbjct 1784139 CTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACAT 1784180
>seq468
Length=902046
Score = 113 bits (124), Expect = 6e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812
||| || ||||| | ||||| || |||| |||| |||| | |||||| |||| ||||||
Sbjct 790169 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 790110
Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872
|| ||||| ||||| |||||| |||||||||||| |||||||| ||| || |||
Sbjct 790109 ATTCGATGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 790050
Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932
| || |||||||| || || || | || || |||| ||| ||||| ||
Sbjct 790049 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATAT 789990
Query 76933 GCCCTCTATACTATCATCCATCATG 76957
|| || || |||||||| |||||
Sbjct 789989 CCCATCAATGCTATCATCTTTCATG 789965
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| |||||||| |||| ||||||||| || ||||| |||||| | ||| | | ||
Sbjct 789176 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 789117
Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
||||||| || | | | ||||| || ||||| || ||||| || | ||||||
Sbjct 789116 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 789057
Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172
||| || ||||| | ||| | ||| | | |||||| | ||| ||| || |
Sbjct 789056 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 788997
Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
||||| ||||||||||| | ||| ||| || || || || |||||
Sbjct 788996 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 788949
Score = 91.5 bits (100), Expect = 2e-13
Identities = 125/172 (73%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551
|||| | ||||||| | ||| | | |||| |||||||||||| |||| |||||||
Sbjct 791675 CTCTTTCTCATATTTTAGATACAGTCTCACAAAGTCATCTCCCCAACAATCAGCCAAACC 791616
Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-AACCCGTTTCATAA 76610
|||| || || || || | |||||||| || ||| | | || || | || ||| |
Sbjct 791615 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCAT-TACTTTGGACTCTTTCCATGA 791557
Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
| ||||| || |||||||| ||| ||| ||||||| || |||| |||| ||
Sbjct 791556 AAAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 791505
>seq403
Length=1478721
Score = 109 bits (120), Expect = 8e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| |||||||| || || |||||||| |||||||||||||| || | ||||
Sbjct 384297 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 384238
Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111
||| |||| ||| | | || ||||| |||| |||||| |||| ||| || | |||||
Sbjct 384237 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 384179
Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171
|||||||||| || | ||| || || | || ||| || | || || | || |
Sbjct 384178 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 384119
Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
||||||||||||||| || | || ||||||||| || ||||| ||
Sbjct 384118 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 384070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712136056058880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |