Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq146110 107 4e-18 seq148765 98.7 2e-15 seq146047 98.7 2e-15 seq108547 98.7 2e-15 seq25070 98.7 2e-15 seq11153 98.7 2e-15 seq112820 93.3 9e-14 seq71323 89.7 1e-12 seq47780 89.7 1e-12 seq145056 86.0 1e-11 >seq146110 Length=166024 Score = 107 bits (118), Expect = 4e-18 Identities = 245/365 (67%), Gaps = 8/365 (2%) Strand=Plus/Minus Query 230168 AATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGA 230227 |||| ||||| ||||| | |||| | | ||| || ||||||||| | || ||||| | Sbjct 154878 AATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCTCCGGCA 154819 Query 230228 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | |||||||||||||| ||||| ||| ||| ||||||| || ||| | | |||| Sbjct 154818 GCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTA 154759 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| |||||||| ||||| | || | ||| ||||| | Sbjct 154758 ACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGCATGCCTTCTGTAT---A 154702 Query 230348 AGCTCCAG---AACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTG 230404 || | | |||||| | | |||| ||| | || || | || || || | Sbjct 154701 GCCTTCTGATCAACAAGATTTCGGAGGAGAGGGTTCGGGAGATTGTTGCCGATGCTGTAG 154642 Query 230405 AAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCT 230463 | | |||||||| || |||| || || | || || ||| ||| | || |||||||| Sbjct 154641 ATATTGAAAAGGAATTTGTTTGCGATGCACTCCCCTG-CGCTCTTGTGGGGATGAACGCA 154583 Query 230464 GAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTAC 230523 || || ||| | | || || |||||||| || || || || ||| || || || || Sbjct 154582 GATCTAATGAGCCGCTATATTGAATTCGTGGCAGATCGGCTTGTTGGAGCTCTGGGCTAT 154523 Query 230524 GAGAA 230528 || || Sbjct 154522 GACAA 154518 >seq148765 Length=217354 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 54896 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 54837 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 54836 CCCACGGTGGGC 54825 >seq146047 Length=266582 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 158535 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 158594 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 158595 CCCACGGTGGGC 158606 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 133899 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGT 133958 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 133959 CCCACGGTGGGC 133970 >seq108547 Length=288280 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 282371 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 282430 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 282431 CCCACGGTGGGC 282442 >seq25070 Length=698914 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 15738 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 15797 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 15798 CCCACGGTGGGC 15809 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 24069 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24128 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 24129 CCCACGGTGGGC 24140 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 15622 GCCCGTCTAGCTCAGTAGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 15681 Query 165770 CCCA 165773 |||| Sbjct 15682 CCCA 15685 >seq11153 Length=129660 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 41739 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 41680 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 41679 CCCACGGTGGGC 41668 >seq112820 Length=388317 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 122497 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 122556 Query 165770 CCCACG 165775 |||||| Sbjct 122557 CCCACG 122562 >seq71323 Length=355131 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||| |||||||||| Sbjct 8036 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGGGGGTTCGAGC 8095 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 8096 CCCCCGGTGGGC 8107 >seq47780 Length=1408 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || ||||||| |||||||||| Sbjct 1397 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGGGGGTTCGAGC 1338 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 1337 CCCCCGGTGGGC 1326 >seq145056 Length=40614 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||| |||||||||| Sbjct 17388 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTATGGTCGGGGGTTCGAGC 17329 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 17328 CCCTCGGTGGGC 17317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055802528417870