Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq127156 96.9 2e-15 seq94009 96.9 2e-15 seq44530 91.5 1e-13 seq98543 86.0 4e-12 seq59128 86.0 4e-12 seq14166 86.0 4e-12 >seq127156 Length=393785 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | || ||| | || |||| ||||||||||||||| Sbjct 285407 TCCTTCTGGATGTTGTAGTCTGCAAGGGTACGACCATCCTCCAGCTGCTTGCCTGCGAAG 285348 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 || | || ||||| ||| || | || ||| || || || ||||| ||| | | Sbjct 285347 ATCAACCTTTGCTGATCGGGAGGGATGCCCTCTTTATC--CTGAATTTTGGCCTTCACGT 285290 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | || | ||| || |||| |||||| || || |||||||||||||||| Sbjct 285289 TGTCGATGGTGTCTGAGCTTTCAACCTCCAGCGTGATAGTCTTACCGGTGAGAGTTTTCA 285230 Query 34377 CAAAGATCTGCATC 34390 | |||||||||||| Sbjct 285229 CGAAGATCTGCATC 285216 >seq94009 Length=1666 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| |||||||||||||| || ||| |||| || | ||| || || || ||| Sbjct 697 TCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGTTTTCCGGCAAAA 638 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATC 34317 || |||| ||||||||| || | || ||| ||||| || ||| ||| | ||| Sbjct 637 ATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTTTGACTTAACGAT- 579 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| || ||||| | || ||||| ||||| ||||| ||||| || Sbjct 578 TTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTGAC 519 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 518 AAAGATCTGCAT 507 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| |||||||| |||||||||||||| ||| ||| |||| Sbjct 262 AGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGCGTTCGGCCGTCC 203 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| ||||| ||||| || |||| |||||| || || | | ||||| || Sbjct 202 TCAAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGTGGGATTCCTTCCTTATCC 143 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||| | | | |||| ||||| || ||||| | || || || Sbjct 142 TGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCCACGTCAAGGGTTATTGTC 83 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||||||||| || || ||||| ||||||||| Sbjct 82 TTGCCGGTGAGGGTCTTGACAAATATCTGCATC 50 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || ||||||||||| || || || | || || | |||||| || ||||| Sbjct 926 TTCCTTTTGGATGTTGTAGTCAGAGAGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAA 867 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | || ||||||||| ||| | || ||||||||| || || ||| | || Sbjct 866 GATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGAATTTTGGACTTGACATT 807 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | |||| || | || || || | |||||| || ||||||||||| || || || Sbjct 806 TTCGATCGTGTCAGAGCTCTCCACCTCAAGCGTGATTGTCTTGCCGGTGAGGGTCTTGAC 747 Query 34378 AAAGATCTGCATCGCTC 34394 ||| ||||||||| ||| Sbjct 746 AAATATCTGCATCCCTC 730 >seq44530 Length=310530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||||| ||| ||| ||||| || ||||| || | || ||| | || Sbjct 31247 AGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCC 31306 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 || | |||||| || || || || |||| ||| || || | |||| | || ||||||||| Sbjct 31307 TCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGG-ATGCCCTCCTTGTC 31365 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | | | | || | ||| | || || || | |||||||| Sbjct 31366 CTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCCACCTCAAGGGTGATGGT 31425 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| ||||| || |||||||||||| Sbjct 31426 CTTGCCTGTGAGGGTTTTGACGAAGATCTGCATC 31459 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | |||| ||| ||||| || |||||||| | ||| ||| | || Sbjct 30563 AGCACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCTGCCAGGGTGCGGCCATCC 30622 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| || ||||| || || || | ||| |||||||| || | || ||||||||| Sbjct 30623 TCCAGTTGTTTGCCAGCAAAGATCAACCGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 30682 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | | | || | ||| | || || || | ||||| || Sbjct 30683 TGGAT-TTTGGCTTTCACGTTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATAGT 30741 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| || || || || |||||||| |||||||| Sbjct 30742 TTTCCCCGTAAGTGTCTTCACAAATATCTGCAT 30774 >seq98543 Length=260802 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || || | |||| ||| ||||| || |||||||| | || || | || Sbjct 27175 AGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCCGCAAGGGTGCGACCATCC 27116 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || || |||||||| ||||||||||| || | | |||||| || Sbjct 27115 TCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGTGGAATCCCCTCCTTATCT 27056 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||| | || | | || | |||| || || || | ||||| ||| Sbjct 27055 TGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCAACTTCAAGTGTGATTGTT 26996 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| ||||||||||| |||||||| Sbjct 26995 TTTCCAGTGAGGGTTTTCACAAATATCTGCAT 26964 >seq59128 Length=96712 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| || ||||| |||| Sbjct 40070 CCCCCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCG 40011 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | |||||| || ||||| || | |||||||| || || Sbjct 40010 AGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATTAAGCGCTGCTGATCTGGTGGA 39951 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| |||||| | | | |||| || | || || || Sbjct 39950 ATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTTGTCGATCGTGTCCGAGGACTCCAC 39892 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || ||||| || |||||||||||| Sbjct 39891 CTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGACGAAGATCTGCATC 39843 >seq14166 Length=498497 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| || ||||| |||| Sbjct 11680 CCCCCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCG 11621 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | |||||| || ||||| || | |||||||| || || Sbjct 11620 AGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATTAAGCGCTGCTGATCTGGTGGA 11561 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| |||||| | | | |||| || | || || || Sbjct 11560 ATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTTGTCGATCGTGTCCGAGGACTCCAC 11502 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || ||||| || |||||||||||| Sbjct 11501 CTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATC 11453 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || ||| ||||| || ||||| |||| Sbjct 8676 CCCCCGCGGAGGCGGAGAACGAGGTGAAGCGTCGATTCCTTCTGAATATTGTAATCGGCG 8617 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| || | |||||||| || || Sbjct 8616 AGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCGAAGATTAAGCGCTGCTGATCTGGTGGA 8557 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| |||||| | | | |||| || | || || || Sbjct 8556 ATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTTGTCGATCGTGTCCGAGGACTCCAC 8498 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || ||||| || |||||||||||| Sbjct 8497 CTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGACGAAGATCTGCATC 8449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322484734761440