Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq146607 102 2e-16 >seq146607 Length=192245 Score = 102 bits (112), Expect = 2e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || ||||||| |||| ||||||||| || ||| ||| || ||| | ||| || Sbjct 46207 GATTTTGACTACGATTATTTTGGTTTCAAAACCCTCGAGCGATCCTACCTCTTGAAAGTT 46266 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 ||| ||| || | ||| | ||| |||||||||||| |||| ||||| ||||||||| Sbjct 46267 TCTGGGAAGGTCATCGAAAGGCCTCAACACATGTTGATGAGAGTTGCTGTTGGGATTCAC 46326 Query 248929 AAGGATGACAT 248939 || ||||| || Sbjct 46327 AAAGATGATAT 46337 Score = 93.3 bits (102), Expect = 9e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || ||||||| |||| ||||||||| || || ||| || ||| | ||| || Sbjct 51274 GATTTTGACTACGATTATTTTGGTTTCAAAACCCTCGAACGATCCTACCTCTTGAAAGTT 51333 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 ||| ||| || | ||| | ||| |||||||||||| |||| |||| ||||||||| Sbjct 51334 TCTGGGAAGGTCATCGAAAGGCCTCAACACATGTTGATGAGAGTTTCTGTTGGGATTCAC 51393 Query 248929 AAGGATGACAT 248939 || ||||| || Sbjct 51394 AAAGATGATAT 51404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071714462944832