Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq70905 82.4 6e-11 >seq70905 Length=9780 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42907 TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGT 42966 |||| ||| |||||| || | |||||| || | | || || | || || | || Sbjct 8766 TGGAGTGTGGACTCCTTCTGGATATTGTAGTCCGCAAGGGTGCGACCATCCTCAAGCTGC 8707 Query 42967 TTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAAC 43026 ||||||||||| || | | ||| || || | || | ||||| || || |||| | Sbjct 8706 TTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTC 8647 Query 43027 TCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 | || || || ||| |||||| | ||| ||| || || | || ||||||||||| || Sbjct 8646 GCCTTCACGTTGTCAATTGTGTC-CGAGCTCTCCACCTCCAAGGTAATAGTTTTTCCAGT 8588 Query 43086 TAGAGTTTTCACAAAAATTTGCAT 43109 |||||||||||||| || ||||| Sbjct 8587 AAGAGTTTTCACAAATATCTGCAT 8564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380676364098642