Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq98543 91.5 1e-13 >seq98543 Length=260802 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTG 143040 |||| |||||||||||| || ||||| ||||| || |||| || | || ||||| || Sbjct 28906 TGAAGTGTAGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGTCCA-TCCTCGAGCTG 28848 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||| || ||| |||| ||||| |||||||| ||||| ||||| || || || ||| || Sbjct 28847 TTTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATCTT 28788 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | || || | | |||||| |||| || | ||||| || || Sbjct 28787 CGCCTTCACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCTTTCCAGT 28728 Query 143161 CAATGTTTTTACGAATATTTGCAT 143184 | || || || || |||||||| Sbjct 28727 AAGAGTCTTCACAAAGATTTGCAT 28704 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||||||||||| || ||||| ||||| || |||| || ||||| ||| Sbjct 27394 TGAAGCGTAGATTCTTTCTGGATGTTATAATCAGCCAGCGTGCGACCATCCTCGAGCTGT 27335 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || ||| |||| ||||| |||||||| ||||| ||||| || || || ||| || Sbjct 27334 TTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATGCCCTCCTTATCCTGAATCTTC 27275 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | || || | | |||||| |||| || | ||||| || || Sbjct 27274 GCCTTCACGTTATCAATTGTATCAGAGCTTTCTACCTCAAGGGTGATGGTCTTTCCAGTA 27215 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 | || || || || |||||||| Sbjct 27214 AGAGTCTTCACAAAGATTTGCAT 27192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506069141365680