Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq148425 118 6e-22 seq54268 114 7e-21 seq143119 113 2e-20 seq139001 107 1e-18 seq136051 105 3e-18 seq103852 105 3e-18 seq39986 105 3e-18 seq148459 104 1e-17 seq131142 104 1e-17 seq117079 104 1e-17 >seq148425 Length=288697 Score = 118 bits (130), Expect = 6e-22 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||| | ||| ||||||||||||| | | |||||||| ||||||||||||||||||| Sbjct 201205 TTAATTTATAAT-AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 201147 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 201146 ACGACGCTCTAACCAACTGAGCTAATGGGCC 201116 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 184009 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 183950 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 183949 CTGAGCTAATAGGCC 183935 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 181890 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 181831 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 181830 TGAGCTAATAGGCC 181817 >seq54268 Length=43073 Score = 114 bits (126), Expect = 7e-21 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| || ||||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 5925 TAAAAAATTTAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 5984 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 5985 CGCTCTAACCAACTGAGCTAATAGGCC 6011 >seq143119 Length=404047 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| || || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 298750 AATAAAACATTTAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 298691 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 298690 GACGCTCTAACCAACTGAGCTAATAGGCC 298662 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 322812 AACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 322753 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 322752 AACTGAGCTAATAGGCC 322736 >seq139001 Length=201889 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 76029 AAACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 75970 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 75969 CAACTGAGCTAATAGGCC 75952 >seq136051 Length=27823 Score = 105 bits (116), Expect = 3e-18 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| | || |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 19195 AAAATAATAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGA 19253 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 19254 TCTAACCAACTGAGCTAATGGGCC 19277 >seq103852 Length=471151 Score = 105 bits (116), Expect = 3e-18 Identities = 80/94 (85%), Gaps = 6/94 (6%) Strand=Plus/Minus Query 11442 ATAAAAAAT-----CAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||||||| ||| | ||||||||| | | |||||||| |||||||||||||||| Sbjct 25773 ATAAAAAATTATTTCAACAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 25714 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||||||||||||| |||| Sbjct 25713 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC 25680 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 30272 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 30213 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||| ||||| Sbjct 30212 TGAGCTAATAGGCCG 30198 >seq39986 Length=175753 Score = 105 bits (116), Expect = 3e-18 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| | || |||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 150840 AAAATAATAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 150782 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||||| |||| Sbjct 150781 TCTAACCAACTGAGCTAATAGGCC 150758 Score = 95.1 bits (104), Expect = 6e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 150703 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 150645 >seq148459 Length=97672 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 14984 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 15043 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 15044 TGAGCTAATAGGCC 15057 >seq131142 Length=45353 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 8935 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 8876 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 8875 TGAGCTAATAGGCC 8862 >seq117079 Length=3689 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2916 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2975 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2976 TGAGCTAATAGGCC 2989 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261015873472324