Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq127156 89.7 5e-13 seq98543 86.0 6e-12 seq78903 86.0 6e-12 >seq127156 Length=393785 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| | || || || | |||||| |||| | ||| Sbjct 284989 ATGCAAATCTTTGTTAAAACTCTTACCGGCAAGACTATCACCCTCGAGGTGGAAAGCTCT 285048 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| || || ||||| || ||||| |||||| Sbjct 285049 GACACCATCGACAACGTGAAAGCAAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAA 285108 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | ||||| || || || |||| | | | | | || || ||| Sbjct 285109 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTGCTGATTACAAC 285168 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || || || ||| ||||||| ||||| Sbjct 285169 ATACAGAAGGAGTCCACTCTCCATCTTGTCCT 285200 >seq98543 Length=260802 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || ||||||| || ||||||| | ||| | || | Sbjct 115626 ATGCAGATTTTTGTGAAGACCCTAACTGGTAAGACGATCACTCTTGAAGTTGAGAGCTCC 115685 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| ||||||||||| || ||||| || || Sbjct 115686 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCAG 115745 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| | |||| | || || || || || || | | | | | || |||||| Sbjct 115746 CAAAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGACGGCCGCACCCTTGCAGATTATAAC 115805 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| ||||||| || || |||| || ||||| Sbjct 115806 ATTCAAAAGGAGTCTACCCTCCATCTTGTGTTGCGACTCAGGGGAGG 115852 >seq78903 Length=243834 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | || || || | |||||| |||| | ||| Sbjct 213066 ATGCAGATCTTTGTTAAGACTCTTACCGGCAAGACTATCACCCTCGAGGTGGAAAGCTCT 213007 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| || || ||||| || ||||| |||||| Sbjct 213006 GACACCATCGACAACGTGAAAGCAAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAA 212947 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | ||||| || || || |||| | | | | | || || ||| Sbjct 212946 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTGCTGATTACAAC 212887 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || ||| ||||||| ||||| | ||||| || || Sbjct 212886 ATACAGAAGGAGTCCACTCTCCATCTTGTCCTCCGCCTTAGGGGTGG 212840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477769999771280