Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq146607 96.9 9e-15 >seq146607 Length=192245 Score = 96.9 bits (106), Expect = 9e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| || || || | ||| ||||| ||| | ||||| |||| | Sbjct 52276 ATGAAAGATGATAGCATTGATGGGATATATGATACACTGAAGGAGTGTGCAGTTATAAGC 52335 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 ||| ||| || ||||||||||| || | || || |||||| ||| | | ||||| || Sbjct 52336 AAGTCTGCTGGAGGAATTGGTGTCTCTGTTCATAACATTCGTGCCACCGGA-AGTTATAT 52394 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || ||| |||||||| | ||||||||| | ||||| ||| | | || Sbjct 52395 TCGTGGAACGAATGGAACGTCGAATGGCATTGTTCCCATGTTGCGTGTTTTTAATGACAC 52454 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 || | || || || || || || |||||| | ||||| || Sbjct 52455 CGCTCGATATGTTGATCAAGGGGGTGGAAAGAGGAAAGGTGC 52496 Score = 91.5 bits (100), Expect = 4e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||| || || || | ||| ||||| ||| | || || |||| | Sbjct 47590 ATGAAAGATGATAGCATTGATGGGATATATGATACACTGAAGGAGTGCGCAGTTATAAGC 47649 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 ||| ||| || ||||||||||| || | || || |||||| ||| | | ||||| || Sbjct 47650 AAGTCTGCTGGAGGAATTGGTGTCTCTGTTCATAACATTCGTGCCACCGGA-AGTTATAT 47708 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || ||| |||||||| | ||||||||| | ||||| ||| | | || Sbjct 47709 TCGTGGAACGAATGGAACGTCGAATGGCATTGTTCCCATGTTGCGTGTTTTTAATGACAC 47768 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 || | || || || || || || |||||| | ||||| || Sbjct 47769 CGCTCGATATGTTGATCAAGGGGGTGGAAAGAGGAAAGGTGC 47810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300862928334518