Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq98543 104 2e-17 seq44530 91.5 1e-13 seq127156 89.7 4e-13 seq94009 82.4 7e-11 >seq98543 Length=260802 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||| || |||| || | ||||| ||| | | Sbjct 23741 ATGCAGATTTTTGTGAAGACCCTAACTGGTAAGACGATCACTCTTGAAGTTGAGAGCTCC 23800 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| |||||||||||||| ||||| || || Sbjct 23801 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCAG 23860 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| | |||| | || ||||| || || |||| | | | | | ||||||||| Sbjct 23861 CAGAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTTGCAGATTATAAC 23920 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || ||||| | ||| | ||||| || | || ||||| Sbjct 23921 ATTCAGAAGGAGTCTACCCTCCATCTTGTGTTGCGACTCAGGGGAGG 23967 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||| || |||| || | ||||| ||| | | Sbjct 26508 ATGCAGATTTTTGTGAAGACCCTAACTGGTAAGACGATCACTCTTGAAGTTGAGAGCTCC 26567 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| |||||||||||||| ||||| || || Sbjct 26568 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCAG 26627 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| | |||| | || ||||| || || |||| | | | | | ||||||||| Sbjct 26628 CAGAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTTGCAGATTATAAC 26687 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || ||||| | ||| | ||||| || | || ||||| Sbjct 26688 ATTCAGAAGGAGTCTACCCTCCATCTTGTGTTGCGACTCAGGGGAGG 26734 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || ||||||| || |||| || | ||||| ||| | | Sbjct 115626 ATGCAGATTTTTGTGAAGACCCTAACTGGTAAGACGATCACTCTTGAAGTTGAGAGCTCC 115685 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| |||||||||||||| ||||| || || Sbjct 115686 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCAG 115745 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || | |||| | || ||||| || || || | | | | | | ||||||||| Sbjct 115746 CAAAGGTTAATTTTTGCTGGGAAGCAGCTTGAGGACGGCCGCACCCTTGCAGATTATAAC 115805 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| || ||||| | ||| | ||||| || | || ||||| Sbjct 115806 ATTCAAAAGGAGTCTACCCTCCATCTTGTGTTGCGACTCAGGGGAGG 115852 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || ||||| || || |||| || | ||||| ||| | Sbjct 115397 AATGCAGATTTTCGTGAAGACCTTAACCGGCAAGACGATCACTCTTGAAGTTGAGAGCTC 115456 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 115457 CGACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCA 115516 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| |||| | | || ||||| ||||| |||| | | | || || ||||| Sbjct 115517 ACAGAGGTTGATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACACTCGCAGACTATAA 115576 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| || || || || Sbjct 115577 CATTCAGAAGGAGTCCAC 115594 >seq44530 Length=310530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| || ||| | Sbjct 31230 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 31171 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| || || || ||||| || || ||||| Sbjct 31170 GACACCATCGACAACGTAAAGGCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAG 31111 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||||||||| |||| | ||| | | |||||||| Sbjct 31110 CAGAGGCTGATCTTTGCCGGCAAGCAACTCGAGGATGGCCGAACCCTTGCTGATTATAAT 31051 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 |||||||| || || || |||| Sbjct 31050 ATTCAAAAGGAGTCCACCCTTCA 31028 >seq127156 Length=393785 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | || || || | || ||| |||| || || | Sbjct 284989 ATGCAAATCTTTGTTAAAACTCTTACCGGCAAGACTATCACCCTCGAGGTGGAAAGCTCT 285048 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| |||||| || || |||||||| ||||| |||||| Sbjct 285049 GACACCATCGACAACGTGAAAGCAAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAA 285108 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||||||||||| | | |||||||| || || |||| Sbjct 285109 CAGAGACTGATCTTTGCTGGCAAGCAGCTGGAGGATG 285145 >seq94009 Length=1666 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| | ||||| || | ||||| |||| || ||| Sbjct 506 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTCTCGACGTGGAGAGTTC 565 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| || || ||| || |||||||| ||||| || || || || Sbjct 566 CGACACCATCGAAATCGTTAAGTCAAAAATCCAGGACAAAGAGGGCATCCCACCGGACCA 625 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| ||||||| | ||| || || || || || | | ||| | || ||| || || Sbjct 626 GCAGAGGCTGATTTTTGCCGGAAAACAGCTTGAGGACGGCCGAACCCTCTCCGACTACAA 685 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 686 CATCCAGAAAGAGTCGAC 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429154482358095