Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq59838 87.8 2e-12 seq71886 86.0 7e-12 seq58422 86.0 7e-12 seq128181 84.2 2e-11 seq80583 84.2 2e-11 seq39033 84.2 2e-11 seq118815 82.4 8e-11 >seq59838 Length=444461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 92200 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 92143 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||| || |||||| ||| | | ||||| || ||||||| || Sbjct 92142 TTCAAATCCCACAGCTGTC-ATTTATTTTTTTAATTTTTATT 92102 >seq71886 Length=124890 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| || | | | ||| Sbjct 31644 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTTTGAGGGCG 31703 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATT 126354 ||||||| || ||||| |||||| ||| || Sbjct 31704 TGGGTTCAAATCCCACTTCTGACACATTTTT 31734 >seq58422 Length=309396 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 167534 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGG 167591 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 167592 GCGTGGGTTCAAATCCCACTTCTGACA 167618 >seq128181 Length=252548 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 234444 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGGG 234501 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 234502 CGTGGGTTCAAATCCCACTTCTGACA 234527 >seq80583 Length=1997 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1197 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGAGAGAGGG 1254 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 1255 CGTGGGTTCAAATCCCACTTCTGACA 1280 >seq39033 Length=205457 Score = 84.2 bits (92), Expect = 2e-11 Identities = 86/109 (79%), Gaps = 9/109 (8%) Strand=Plus/Minus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA- 126320 || ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| | Sbjct 122106 TAAAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAAAG 122049 Query 126321 ---GCGTGGGTTCGAACCCCACACCTGACA-AATTATTATTGGAATTTT 126365 |||||||||| || ||||| |||||| ||||| | || |||||| Sbjct 122048 AAGGCGTGGGTTCAAATCCCACTTCTGACAGAATTA--AATGTAATTTT 122002 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 7/105 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| | Sbjct 161852 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAAAGAAG 161795 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTT 126365 |||||||||| || ||||| |||||| | | ||| || |||||| Sbjct 161794 GCGTGGGTTCAAATCCCACTTCTGACAGAAT-TTAATGTAATTTT 161751 >seq118815 Length=52577 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||| || | | | ||| Sbjct 35505 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGTTTGAGGGCG 35564 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 35565 TGGGTTCAAATCCCACTTCTGACA 35588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555822609606760