Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq146110 105 1e-17 >seq146110 Length=166024 Score = 105 bits (116), Expect = 1e-17 Identities = 157/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 |||||| || || |||||||| ||| |||| | ||||||||||||||||| || | Sbjct 154844 CGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGG 154785 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | |||||| || ||||| || || ||||| |||||| | |||||||| || || | Sbjct 154784 TTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACTG 154725 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||| ||||| ||| | |||| || | ||||| ||| ||||| |||| Sbjct 154724 CGACTTTGCATGCCTTCTG---TATAGCCTTCTGATCAACAAGATTTCGGAGGAGAGGGT 154668 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 |||| || | | || || || || || || ||||| || Sbjct 154667 TCGGGAGATTGTTGCCGATGCTGTAGATATTGAAAAGGAATT 154626 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 ||||||||||||||||| ||||| || || || |||||||| ||| | |||||| Sbjct 155304 CTGGCCTTCTTCGCCGCTTCTGATGGTATCGTGCTGGAGAACCTCGCCGGACGCTTCATG 155245 Query 42483 AAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 |||||| || |||| ||||||||| ||||| ||||||||||| ||||| || | Sbjct 155244 CGAGAGGTTCA--ACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGCCATCGAAA 155187 Query 42541 ACGTGCACTCTGAGGTGTA 42559 || | ||||| ||| |||| Sbjct 155186 ACATTCACTCCGAGATGTA 155168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942578609408240