Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq146110 105 8e-18 seq133767 87.8 2e-12 seq57680 87.8 2e-12 >seq146110 Length=166024 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||| ||||||||||| |||||||| || || || || |||||| Sbjct 154716 GCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCT 154775 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| |||||||| | |||||| || || || || ||| |||||||| || Sbjct 154776 GGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATA 154835 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || || || ||||| || || | | ||||| ||||| || Sbjct 154836 CCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGA 154876 >seq133767 Length=751646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 223/334 (67%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 12735 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAG 12794 || ||||| || |||||| || || || | || | ||| || || | || || Sbjct 738265 TCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTTCAAAA 738324 Query 12795 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATA 12854 |||||||| |||||||| || || || | |||||||| | |||||||||| | | Sbjct 738325 CCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCTCCA 738384 Query 12855 CCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT 12914 ||||| | | |||| | || || || || ||||| |||| ||| || ||||| ||| Sbjct 738385 ATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAAGGT 738444 Query 12915 TGATTTTCACGGGCAA-CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAA 12973 ||| || || ||| ||| | ||| || || | ||| || ||||| ||||| Sbjct 738445 GCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAACAAA 738503 Query 12974 CATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGA 13032 |||||||||||| | | | | | || | || ||||| || | |||||| || | Sbjct 738504 CATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGCAA 738562 Query 13033 TGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 |||| ||| || || ||||| || || || || Sbjct 738563 TGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 738596 Score = 87.8 bits (96), Expect = 2e-12 Identities = 223/334 (67%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 12735 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAG 12794 || ||||| || |||||| || || || | || | ||| || || | || || Sbjct 745326 TCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTTCAAAA 745385 Query 12795 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATA 12854 |||||||| |||||||| || || || | |||||||| | |||||||||| | | Sbjct 745386 CCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCTCCA 745445 Query 12855 CCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT 12914 ||||| | | |||| | || || || || ||||| |||| ||| || ||||| ||| Sbjct 745446 ATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAAGGT 745505 Query 12915 TGATTTTCACGGGCAA-CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAA 12973 ||| || || ||| ||| | ||| || || | ||| || ||||| ||||| Sbjct 745506 GCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAACAAA 745564 Query 12974 CATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGA 13032 |||||||||||| | | | | | || | || ||||| || | |||||| || | Sbjct 745565 CATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGCAA 745623 Query 13033 TGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 |||| ||| || || ||||| || || || || Sbjct 745624 TGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 745657 >seq57680 Length=1257 Score = 87.8 bits (96), Expect = 2e-12 Identities = 223/334 (67%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 12735 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAG 12794 || ||||| || |||||| || || || | || | ||| || || | || || Sbjct 1170 TCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTTCAAAA 1111 Query 12795 CCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATA 12854 |||||||| |||||||| || || || | |||||||| | |||||||||| | | Sbjct 1110 CCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCTCCA 1051 Query 12855 CCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT 12914 ||||| | | |||| | || || || || ||||| |||| ||| || ||||| ||| Sbjct 1050 ATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAAGGT 991 Query 12915 TGATTTTCACGGGCAA-CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAA 12973 ||| || || ||| ||| | ||| || || | ||| || ||||| ||||| Sbjct 990 GCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAACAAA 932 Query 12974 CATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGA 13032 |||||||||||| | | | | | || | || ||||| || | |||||| || | Sbjct 931 CATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGCAA 873 Query 13033 TGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 |||| ||| || || ||||| || || || || Sbjct 872 TGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612363400182840