Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq146110 120 5e-22 >seq146110 Length=166024 Score = 120 bits (132), Expect = 5e-22 Identities = 243/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Plus Query 159734 CCGAGAGCCGCCAGCAACCTG-TCTGCCACAAATTCGATGTAGCTACACATCTGCTCACA 159792 || ||||| ||| ||| | | |||||||| ||||| || |||| | ||| | || Sbjct 154527 CCCAGAGCT-CCAACAAGCCGATCTGCCACGAATTCAATATAGCGGCTCATTAGATCTGC 154585 Query 159793 GTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGAC 159852 ||| ||||||| || |||||| || || | | ||| ||||| ||||| || || Sbjct 154586 GTTCATCCCCACAAGAGCGCAGGGGAGTGCATCGCAAACAAATTCCTTTTCAATATCTAC 154645 Query 159853 CGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTT 159912 || |||| ||||||| | || | || | | |||| | | || | Sbjct 154646 AGCATCGGCAACAATCTCCCGAACCCTCTCCTCCGAAATCTTGTTGATCAGAAGGC---T 154702 Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972 | |||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||| || Sbjct 154703 ATACAGAAGGCATGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGA 154762 Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-AC 160031 | |||| || ||||| | || ||| |||||||| || |||| |||| |||| | Sbjct 154763 AAAAGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGG-CGCAGAAGCTGC 154821 Query 160032 CGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGA 160086 || || || || || || ||| |||||| || | | || |||| |||| || Sbjct 154822 CGGAGAAGAAAATACCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGA 154876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793672742463440