Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq14166 89.7 4e-13 seq127156 84.2 2e-11 seq59128 84.2 2e-11 >seq14166 Length=498497 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || ||||| |||||||| | ||| | || || | || |||||| | || Sbjct 8641 TTCCTTCTGAATATTGTAATCGGCGAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCGAA 8582 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||||| ||||||||||| | || | ||| || ||||| || || ||||| ||| Sbjct 8581 GATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAA-CGT 8523 Query 39648 CG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706 | | | ||||| | | ||||| || | || ||||| |||||||||| ||||| | Sbjct 8522 TGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGA 8463 Query 39707 CGAAGATCTGCAT 39719 ||||||||||||| Sbjct 8462 CGAAGATCTGCAT 8450 >seq127156 Length=393785 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 || || || || || || ||||||| | ||| |||| || | ||| || ||| |||| Sbjct 285635 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGCCCATCCTCAAGTTGCTTTCCGGCAAAG 285576 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || | | |||||| |||| || | |||||| ||||| ||| || ||| | | Sbjct 285575 ATAAGCCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGTATCTTGGCTTTCACGTTA 285516 Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708 | | ||||| | ||| || || ||||| ||||| || || || || | ||| || ||| Sbjct 285515 TCGATGGTGTCCGAGCTCTCAACCTCCAAGGTAATGGTCTTCCCAGTAAGAGTCTTCACG 285456 Query 39709 AAGATCTGCAT 39719 ||||||||||| Sbjct 285455 AAGATCTGCAT 285445 >seq59128 Length=96712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || ||||| |||||||| | || | || || | || |||||| | || Sbjct 40035 TTCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAA 39976 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||||| ||||||||||| | || | ||| || ||||| || || ||||| ||| Sbjct 39975 GATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAA-CGT 39917 Query 39648 CG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706 | | | ||||| | | ||||| || | || ||||| |||||||||| ||||| | Sbjct 39916 TGTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGA 39857 Query 39707 CGAAGATCTGCAT 39719 ||||||||||||| Sbjct 39856 CGAAGATCTGCAT 39844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346738167715517