Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq133767 174 2e-38 seq57680 174 2e-38 seq124605 100 3e-16 seq146110 98.7 1e-15 seq122030 87.8 2e-12 seq36392 87.8 2e-12 >seq133767 Length=751646 Score = 174 bits (192), Expect = 2e-38 Identities = 243/336 (72%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9281 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 738264 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 738321 Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 738322 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 738381 Query 9342 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 | ||| | | | |||| |||| || ||||| || ||||||| ||| |||||||| Sbjct 738382 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 738441 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 ||| ||| || || | | || ||||| ||||||| | |||||| ||||||||| Sbjct 738442 GGTGCATTCTCTTTAGCCTTCTTGAAAAGATCACGAACCCGTGAGGCGCCAACACCAACA 738501 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||||||||| | | | | | || | || ||||| ||| || |||||| || Sbjct 738502 AACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGC 738560 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 |||||| ||| || |||||||| || ||||| || Sbjct 738561 AATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 738596 Score = 174 bits (192), Expect = 2e-38 Identities = 243/336 (72%), Gaps = 6/336 (2%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9281 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 745325 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 745382 Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 745383 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 745442 Query 9342 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 | ||| | | | |||| |||| || ||||| || ||||||| ||| |||||||| Sbjct 745443 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 745502 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 ||| ||| || || | | || ||||| ||||||| | |||||| ||||||||| Sbjct 745503 GGTGCATTCTCTTTAGCCTTCTTGAAAAGATCACGAACCCGTGAGGCGCCAACACCAACA 745562 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||||||||| | | | | | || | || ||||| ||| || |||||| || Sbjct 745563 AACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGC 745621 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 |||||| ||| || |||||||| || ||||| || Sbjct 745622 AATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 745657 >seq57680 Length=1257 Score = 174 bits (192), Expect = 2e-38 Identities = 243/336 (72%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9281 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 1171 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 1114 Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 1113 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 1054 Query 9342 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 | ||| | | | |||| |||| || ||||| || ||||||| ||| |||||||| Sbjct 1053 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 994 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 ||| ||| || || | | || ||||| ||||||| | |||||| ||||||||| Sbjct 993 GGTGCATTCTCTTTAGCCTTCTTGAAAAGATCACGAACCCGTGAGGCGCCAACACCAACA 934 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||||||||| | | | | | || | || ||||| ||| || |||||| || Sbjct 933 AACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAGC 875 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 |||||| ||| || |||||||| || ||||| || Sbjct 874 AATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 839 >seq124605 Length=252891 Score = 100 bits (110), Expect = 3e-16 Identities = 244/366 (67%), Gaps = 8/366 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9338 ||| ||||||||||| ||||| || || ||||| || ||||| | |||||||| | | Sbjct 104574 AAATCCATCCATCTCAGTCAAGAGCTGATTAATGGTCTGTTCTCTCTCATCATTACCACC 104633 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 || | ||||| | | ||| |||| || ||||||||||| ||||| || |||||| Sbjct 104634 ACCAAGC--CCAGCCCCTCTCTGCCTTCCAACCGCATCAATCTCGTCAATAAAAACAATA 104691 Query 9399 CATGGTTGATTTTCGC--GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACAC 9456 || || |||||| || | ||||| | ||| | |||||| || || || | Sbjct 104692 CAGGG--AGCTTTCGCCTTTGCCTTCTCAAACAAATCCCTCACCCTTGAAGCTCCAACTC 104749 Query 9457 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 9516 ||||||| | || ||||| | || || | ||| | |||||| ||| || || | Sbjct 104750 CAACAAAAAGTTCAACAAACTCTGAAGCAGCACACGAAAAGAAGGGCACACCAGCCTCGC 104809 Query 9517 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9576 | || | || || || || || ||||| || || || ||| || | | ||| || Sbjct 104810 CGGCGACCGCCCGAGCTAGCAGCGTCTTCCCAGTTCCCGGCGGCCCAACCAAAAGGCAAC 104869 Query 9577 CCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAA 9636 | |||||||| || ||| | |||| | ||||| | ||| | |||||| || | Sbjct 104870 CTTTGGGAATCTTAGCACCAAGAGCCGTGTATTTATCAGGATTCTTCAAAAAATCGACGA 104929 Query 9637 TCTCTT 9642 |||| Sbjct 104930 CTTCTT 104935 Score = 100 bits (110), Expect = 3e-16 Identities = 244/366 (67%), Gaps = 8/366 (2%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9338 ||| ||||||||||| ||||| || || ||||| || ||||| | |||||||| | | Sbjct 153907 AAATCCATCCATCTCAGTCAAGAGCTGATTAATGGTCTGTTCTCTCTCATCATTACCACC 153966 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 || | ||||| | | ||| |||| || ||||||||||| ||||| || |||||| Sbjct 153967 ACCAAGC--CCAGCCCCTCTCTGCCTTCCAACCGCATCAATCTCGTCAATAAAAACAATA 154024 Query 9399 CATGGTTGATTTTCGC--GGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACAC 9456 || || |||||| || | ||||| | ||| | |||||| || || || | Sbjct 154025 CAGGG--AGCTTTCGCCTTTGCCTTCTCAAACAAATCCCTCACCCTTGAAGCTCCAACTC 154082 Query 9457 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 9516 ||||||| | || ||||| | || || | ||| | |||||| ||| || || | Sbjct 154083 CAACAAAAAGTTCAACAAACTCTGAAGCAGCACACGAAAAGAAGGGCACACCAGCCTCGC 154142 Query 9517 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9576 | || | || || || || || ||||| || || || ||| || | | ||| || Sbjct 154143 CGGCGACCGCCCGAGCTAGCAGCGTCTTCCCAGTTCCCGGCGGCCCAACCAAAAGGCAAC 154202 Query 9577 CCCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAA 9636 | |||||||| || ||| | |||| | ||||| | ||| | |||||| || | Sbjct 154203 CTTTGGGAATCTTAGCACCAAGAGCCGTGTATTTATCAGGATTCTTCAAAAAATCGACGA 154262 Query 9637 TCTCTT 9642 |||| Sbjct 154263 CTTCTT 154268 >seq146110 Length=166024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || |||||| ||||| || || || || || || || || || || ||| Sbjct 154716 GCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCT 154775 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| | ||| |||||||| | ||| | || |||||||| ||||||||||| ||| Sbjct 154776 GGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATA 154835 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAAC 117453 || || || |||||||| || | || ||||| || || || ||| | ||||| | Sbjct 154836 CCTTCGACGCACGCAAAAGCGAGAATCCGCTCAGCAAATGATTCAGA---GGCGTCAATC 154892 Query 117454 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 || || |||||| | ||||| | | || ||||| |||| |||||| Sbjct 154893 CAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGC 154945 >seq122030 Length=308131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || ||||| ||||||||||| ||||| || ||||| | ||| |||||| || || Sbjct 209330 GCAATTGACGCCAAATTGCATACAGCAGTTTCATCAGGACTCGTGAACTCTATTATCTCA 209389 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||| |||||| ||| || || || | || ||||| ||||| ||| | ||||| Sbjct 209390 GTGCACAAATTGGAAGACTTTATGGTACCAAGGTTGTTTTGATTACTTTTTCTATTGCAA 209449 Query 106583 GCATCCTT 106590 |||||||| Sbjct 209450 GCATCCTT 209457 >seq36392 Length=7666 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || ||||| ||||||||||| ||||| || ||||| | ||| |||||| || || Sbjct 150 GCAATTGACGCCAAATTGCATACAGCAGTTTCATCAGGACTCGTGAACTCTATTATCTCA 91 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||| |||||| ||| || || || | || ||||| ||||| ||| | ||||| Sbjct 90 GTGCACAAATTGGAAGACTTTATGGTACCAAGGTTGTTTTGATTACTTTTTCTATTGCAA 31 Query 106583 GCATCCTT 106590 |||||||| Sbjct 30 GCATCCTT 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588880861920760