Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq44530 96.9 3e-15 seq93447 91.5 1e-13 seq59128 89.7 4e-13 seq14166 89.7 4e-13 seq94009 87.8 1e-12 seq142522 84.2 2e-11 seq44588 84.2 2e-11 seq148200 82.4 6e-11 >seq44530 Length=310530 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | || | || || ||| ||| ||||||||||| ||||||| Sbjct 31004 CCACCCCTGAGGCGAAGAACAAGGTGAAGGGTGGACTCCTTTTGAATATTATAATCAGCA 31063 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| | || || | ||||| |||||||| ||||| | ||| ||||||| |||| Sbjct 31064 AGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCCGGGGGA 31123 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||| || ||||| ||||| | | | || || ||||||| Sbjct 31124 ATGCCCTCCTTATCCTGGATCTTAGCCTTTACGTTGTCGATGGTGTCAGAGCTCTCCACC 31183 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || || |||||||||||| Sbjct 31184 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCATC 31231 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||| | ||||| || || || || ||||||||||||| Sbjct 31232 CCACCCCTAAGACGAAGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCAGCA 31291 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| | || || | |||||| |||||||| ||||| | ||||||||||| || Sbjct 31292 AGGGTTCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGCGGG 31351 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || ||||||| Sbjct 31352 ATGCCCTCCTTGTCCTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCCACC 31411 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | ||||| || || ||||||||| Sbjct 31412 TCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTGACGAAGATCTGCATC 31459 >seq93447 Length=80558 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || ||||| || |||| |||| | || | || || | |||||| ||||| || Sbjct 27713 CTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 27654 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || || || || |||| |||| ||| |||||||| ||||| || || Sbjct 27653 GATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTT 27594 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||||||||||| || ||||| || ||||| || |||||||| Sbjct 27593 GTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAAGGTTTTTAC 27534 Query 48755 AAAAATCTGCATC 48767 || ||||||||| Sbjct 27533 GAAGATCTGCATC 27521 >seq59128 Length=96712 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||||||||| | || | || |||| || | |||||| ||||| || Sbjct 40034 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAG 39975 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| ||||| | |||| |||||||||||| |||||| ||| || Sbjct 39974 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAACGTTG 39915 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||||||||| | || || || || ||||| | ||||| || Sbjct 39914 TCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGACG 39855 Query 48756 AAAATCTGCATC 48767 || ||||||||| Sbjct 39854 AAGATCTGCATC 39843 >seq14166 Length=498497 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||||||||| | || | || |||| || | |||||| ||||| || Sbjct 8640 TCCTTCTGAATATTGTAATCGGCGAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCGAAG 8581 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| ||||| | |||| |||||||||||| |||||| ||| || Sbjct 8580 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAACGTTG 8521 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||||||||| | || || || || ||||| | ||||| || Sbjct 8520 TCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGACG 8461 Query 48756 AAAATCTGCATC 48767 || ||||||||| Sbjct 8460 AAGATCTGCATC 8449 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||||||||| | || | || |||| || | |||||| ||||| || Sbjct 11644 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAG 11585 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| ||||| | |||| |||||||||||| |||||| ||| || Sbjct 11584 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCTTTAACGTTG 11525 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||||||||| | || || || || ||||| | ||||| || Sbjct 11524 TCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGACG 11465 Query 48756 AAAATCTGCATC 48767 || ||||||||| Sbjct 11464 AAGATCTGCATC 11453 >seq94009 Length=1666 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | || | ||| || ||| || ||||| || ||||| ||||| Sbjct 961 CCCCCTCTGAGACGGAGAACGAGATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAG 902 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||||| | || || | |||||| ||||| || |||| | ||| || |||| ||| Sbjct 901 AGGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGG 842 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||| || || ||| | | | || || ||||||| Sbjct 841 ATGCCCTCCTTGTCTTGAATTTTGGACTTGACATTTTCGATCGTGTCAGAGCTCTCCACC 782 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | ||| || || || || || | || || ||||| ||||||||| Sbjct 781 TCAAGCGTGATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCATC 734 >seq142522 Length=12496 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| ||| || ||||| || || ||| || ||||| |||||||| | | Sbjct 3814 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 3755 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || ||||| || || ||||| |||| ||||||||||| | ||| Sbjct 3754 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGCTGTTGATCAGGTGGA 3695 Query 48660 ACGCCCTCCTTGTC 48673 | ||| |||||||| Sbjct 3694 ATGCCTTCCTTGTC 3681 >seq44588 Length=1198 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| ||| || ||||| || || ||| || ||||| |||||||| | | Sbjct 490 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 549 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || ||||| || || ||||| |||| ||||||||||| | ||| Sbjct 550 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGCTGTTGATCAGGTGGA 609 Query 48660 ACGCCCTCCTTGTC 48673 | ||| |||||||| Sbjct 610 ATGCCTTCCTTGTC 623 >seq148200 Length=216050 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || ||||| || |||| ||| | || | || || | |||||| ||||| || Sbjct 147902 CTCCTTCTGGATATTATAGTCAGCCAGAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 147843 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || || || || |||| |||| ||| |||||||| ||||| || || Sbjct 147842 GATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTT 147783 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||||||||||| || ||||| || ||||| | |||||||| Sbjct 147782 GTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTTAC 147723 Query 48755 AAAAATCTGCATC 48767 || ||||||||| Sbjct 147722 GAAGATCTGCATC 147710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380245149368127