Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq104867 93.3 1e-13 seq147506 84.2 5e-11 seq93847 84.2 5e-11 >seq104867 Length=862580 Score = 93.3 bits (102), Expect = 1e-13 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||| Sbjct 798554 GCGGAGTAGAGCAGTTTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 798610 Query 324480 AATCCCACCTCCGCA 324494 ||||| | ||||||| Sbjct 798611 AATCCTATCTCCGCA 798625 Score = 89.7 bits (98), Expect = 1e-12 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||| Sbjct 823927 GCGGAGTAGAGCAGTTTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 823871 Query 324480 AATCCCACCTCCGCA 324494 ||||| | |||| || Sbjct 823870 AATCCTATCTCCACA 823856 >seq147506 Length=118584 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 66916 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 66860 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 66859 AATCCTGTCTCCGCA 66845 >seq93847 Length=9265 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 324420 GCGGAGTAGAGCAGTCTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCGTGTTTGGTTCG 324479 ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| Sbjct 1723 GCGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACG---GGTTCA 1779 Query 324480 AATCCCACCTCCGCA 324494 ||||| ||||||| Sbjct 1780 AATCCTGTCTCCGCA 1794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1145397387380202