Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq122030 87.8 9e-13 seq39102 87.8 9e-13 >seq122030 Length=308131 Score = 87.8 bits (96), Expect = 9e-13 Identities = 158/226 (70%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 |||||||| ||||| ||||| |||||||| || || | ||||| ||||||||||| Sbjct 210237 CTACCTTTCCTTTTCCCTCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGT 210296 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 | ||||||||||| ||| | |||| || || || | | ||| | || |||| Sbjct 210297 AGCATTGGAACTACACCATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCA 210356 Query 26183 CTAATATCGTGAGCATG--AATACCGATTCCACCAGCCCATT---TTGAAATAGCTGCAC 26237 | ||| | |||| ||| | ||| ||||| ||||| ||| || ||||| |||| Sbjct 210357 CGAATGTTGTGA--ATGGAGACACCAATTCCGCCAGCAGATTTGCTTATTATAGC-GCAC 210413 Query 26238 AATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 ||| | ||||| | ||||||| ||||||||| ||||||| Sbjct 210414 --TCTTTCAAGGTATCATATATTCCTTCAATGCTATCATCTTTCAT 210457 >seq39102 Length=2222 Score = 87.8 bits (96), Expect = 9e-13 Identities = 158/226 (70%), Gaps = 10/226 (4%) Strand=Plus/Minus Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 |||||||| ||||| ||||| |||||||| || || | ||||| ||||||||||| Sbjct 1214 CTACCTTTCCTTTTCCCTCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGT 1155 Query 26123 AACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 | ||||||||||| ||| | |||| || || || | | ||| | || |||| Sbjct 1154 AGCATTGGAACTACACCATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCA 1095 Query 26183 CTAATATCGTGAGCATG--AATACCGATTCCACCAGCCCATT---TTGAAATAGCTGCAC 26237 | ||| | |||| ||| | ||| ||||| ||||| ||| || ||||| |||| Sbjct 1094 CGAATGTTGTGA--ATGGAGACACCAATTCCGCCAGCAGATTTGCTTATTATAGC-GCAC 1038 Query 26238 AATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 ||| | ||||| | ||||||| ||||||||| ||||||| Sbjct 1037 --TCTTTCAAGGTATCATATATTCCTTCAATGCTATCATCTTTCAT 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252580035670175