Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq133767 125 9e-24 seq57680 123 3e-23 seq124605 107 2e-18 seq146110 98.7 1e-15 >seq133767 Length=751646 Score = 125 bits (138), Expect = 9e-24 Identities = 305/461 (66%), Gaps = 6/461 (1%) Strand=Plus/Minus Query 175237 GTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCCCGAGGC 175296 ||||| ||||| ||| |||| || || | | || ||||| || || ||| Sbjct 745735 GTGGAGTTTCTTAAGAAACCAGAAAGGTTTACTGCTGTCGGTGCTCGTATACCTAAAGGT 745676 Query 175297 GCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGT 175356 | |||||| ||| || ||||| |||||||| || || ||| ||||| || ||| Sbjct 745675 GTTCTTCTCATTGGTCCTCCTGGTACTGGAAAGACTCTACTTGCCAAGGCCATTGCTGGT 745616 Query 175357 GAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGT 175416 ||| | ||| || || || ||| | | | ||||||||||||||||||||| Sbjct 745615 GAAGCTGGTGTTCCCTTTTTCTCTATCTCAGGATCTGAGTTTGTGGAGATGTTTGTTGGT 745556 Query 175417 GTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATT 175476 || || ||| | ||||||| ||||| || | | || || ||| ||| |||||| Sbjct 745555 GTTGGCGCCTCACGGGTTCGTGATCTTTTCAAGAAGGCTAAAGAGAATGCACCTTGTATT 745496 Query 175477 GTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCA 175536 || ||| ||||||| || ||||| || || | |||| | | | ||| | | Sbjct 745495 GTATTCGTTGATGAAATAGATGCTGTTGGAAGGCAAAGAGGAACGGGTATTGGAGGGGGG 745436 Query 175537 AATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAAT 175596 ||||| || ||||||||||| | || || || | || || |||||||| ||||| Sbjct 745435 AATGATGAAAGAGAACAAACTCTGAACCAGCTTTTGACTGAAATGGATGGTTTTGAAGGA 745376 Query 175597 GAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTC 175656 | || || || | ||| |||| || ||||| |||| || ||||| ||| ||| | Sbjct 745375 AATACAGGTATCATAGTTCTTGCAGCTACTAACCGCGCAGACATCCTGGATTCCGCATTG 745316 Query 175657 CTTCGCCCGGGTCGTTTTGATCGCAAGATCCAAGTGGGTCT 175697 || | || || | |||||| ||| || |||||||| Sbjct 745315 CTAAGGCCTGGAAGGTTTGAT----AGA--CAGGTGGGTCT 745281 Score = 123 bits (136), Expect = 3e-23 Identities = 258/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| |||||||| || || ||| ||||| || |||||| | ||| || || Sbjct 738596 CCTGGTACTGGAAAGACTCTACTTGCCAAGGCCATTGCTGGTGAAGCTGGTGTTCCCTTT 738537 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || ||| | | | ||||||||||||||||||||||| || ||| | ||||| Sbjct 738536 TTCTCTATCTCAGGATCTGAGTTTGTGGAGATGTTTGTTGGTGTTGGCGCCTCACGGGTT 738477 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATT 175494 || ||||| || | | || || ||| ||| |||||||| ||| ||||||| || Sbjct 738476 CGTGATCTTTTCAAGAAGGCTAAAGAGAATGCACCTTGTATTGTATTCGTTGATGAAATA 738417 Query 175495 GATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAA 175554 ||||| || || | |||| | | | ||| | | ||||| || ||||||||| Sbjct 738416 GATGCTGTTGGAAGGCAAAGAGGAACGGGTATTGGAGGGGGGAATGATGAAAGAGAACAA 738357 Query 175555 ACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTT 175614 || | || || || | || || |||||||| ||||| | || || || | ||| Sbjct 738356 ACTCTGAACCAGCTTTTGACTGAAATGGATGGTTTTGAAGGAAATACAGGTATCATAGTT 738297 Query 175615 ATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTT 175674 |||| || ||||| |||| || ||||| ||| ||| | || | || || | ||| Sbjct 738296 CTTGCAGCTACTAACCGCGCAGACATCCTGGATTCCGCATTGCTAAGGCCTGGAAGGTTT 738237 Query 175675 GATCGCAAGATCCAAGTGGGTCT 175697 ||| ||| || |||||||| Sbjct 738236 GAT----AGA--CAGGTGGGTCT 738220 >seq57680 Length=1257 Score = 123 bits (136), Expect = 3e-23 Identities = 258/383 (67%), Gaps = 6/383 (2%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || ||||| |||||||| || || ||| ||||| || |||||| | ||| || || Sbjct 839 CCTGGTACTGGAAAGACTCTACTTGCCAAGGCCATTGCTGGTGAAGCTGGTGTTCCCTTT 898 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || ||| | | | ||||||||||||||||||||||| || ||| | ||||| Sbjct 899 TTCTCTATCTCAGGATCTGAGTTTGTGGAGATGTTTGTTGGTGTTGGCGCCTCACGGGTT 958 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATT 175494 || ||||| || | | || || ||| ||| |||||||| ||| ||||||| || Sbjct 959 CGTGATCTTTTCAAGAAGGCTAAAGAGAATGCACCTTGTATTGTATTCGTTGATGAAATA 1018 Query 175495 GATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAA 175554 ||||| || || | |||| | | | ||| | | ||||| || ||||||||| Sbjct 1019 GATGCTGTTGGAAGGCAAAGAGGAACGGGTATTGGAGGGGGGAATGATGAAAGAGAACAA 1078 Query 175555 ACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTT 175614 || | || || || | || || |||||||| ||||| | || || || | ||| Sbjct 1079 ACTCTGAACCAGCTTTTGACTGAAATGGATGGTTTTGAAGGAAATACAGGTATCATAGTT 1138 Query 175615 ATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTT 175674 |||| || ||||| |||| || ||||| ||| ||| | || | || || | ||| Sbjct 1139 CTTGCAGCTACTAACCGCGCAGACATCCTGGATTCCGCATTGCTAAGGCCTGGAAGGTTT 1198 Query 175675 GATCGCAAGATCCAAGTGGGTCT 175697 ||| ||| || |||||||| Sbjct 1199 GAT----AGA--CAGGTGGGTCT 1215 >seq124605 Length=252891 Score = 107 bits (118), Expect = 2e-18 Identities = 250/374 (67%), Gaps = 10/374 (3%) Strand=Plus/Minus Query 175222 GAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCC 175281 || ||| |||| | || |||||| | ||| | || || | ||| | |||||| Sbjct 104942 GAGCTTCAAGAAGTCGTCGATTTTTTGAAGAATCCTGATAAATACACGGCTCTTGGTGCT 104883 Query 175282 AAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCC 175341 ||||| ||| ||| |||| | | || ||| || || || ||||| || || || Sbjct 104882 AAGATTCCCAAAGGTTGCCTTTTGGTTGGGCCGCCGGGAACTGGGAAGACGCTGCTAGCT 104823 Query 175342 CGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTG 175401 || || |||| || || | ||| || ||| | ||| |||| || | ||||| Sbjct 104822 CGGGCGGTCGCCGGCGAGGCTGGTGTGCCCTTCTTTTCGTGTGCTGCTTCAGAGTTTGTT 104763 Query 175402 GAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCC--GCG 175459 || | |||||||| || || || |||||| | ||| | ||||| | || ||| Sbjct 104762 GAACTTTTTGTTGGAGTTGGAGCTTCAAGGGTGAGGGATTTGTTTGAGAAGGCAAAGGCG 104703 Query 175460 AAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG 175519 ||| || |||||||| || ||||| |||||||||||||| || | ||| | | | Sbjct 104702 AAAGCT--CCCTGTATTGTTTTTATTGACGAGATTGATGCGGTTGGAAGGCAGAGAGGGG 104645 Query 175520 CTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCG 175576 |||| |||| | ||||| ||||||||||| || |||||||| || | || | Sbjct 104644 CTGGGCTTGGTGGT---GGTAATGATGAGAGAGAACAGACCATTAATCAGCTCTTGACTG 104588 Query 175577 AGATGGATGGCTTT 175590 |||||||||| ||| Sbjct 104587 AGATGGATGGATTT 104574 Score = 107 bits (118), Expect = 2e-18 Identities = 250/374 (67%), Gaps = 10/374 (3%) Strand=Plus/Minus Query 175222 GAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCC 175281 || ||| |||| | || |||||| | ||| | || || | ||| | |||||| Sbjct 154275 GAGCTTCAAGAAGTCGTCGATTTTTTGAAGAATCCTGATAAATACACGGCTCTTGGTGCT 154216 Query 175282 AAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCC 175341 ||||| ||| ||| |||| | | || ||| || || || ||||| || || || Sbjct 154215 AAGATTCCCAAAGGTTGCCTTTTGGTTGGGCCGCCGGGAACTGGGAAGACGCTGCTAGCT 154156 Query 175342 CGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTG 175401 || || |||| || || | ||| || ||| | ||| |||| || | ||||| Sbjct 154155 CGGGCGGTCGCCGGCGAGGCTGGTGTGCCCTTCTTTTCGTGTGCTGCTTCAGAGTTTGTT 154096 Query 175402 GAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCC--GCG 175459 || | |||||||| || || || |||||| | ||| | ||||| | || ||| Sbjct 154095 GAACTTTTTGTTGGAGTTGGAGCTTCAAGGGTGAGGGATTTGTTTGAGAAGGCAAAGGCG 154036 Query 175460 AAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCG 175519 ||| || |||||||| || ||||| |||||||||||||| || | ||| | | | Sbjct 154035 AAAGCT--CCCTGTATTGTTTTTATTGACGAGATTGATGCGGTTGGAAGGCAGAGAGGGG 153978 Query 175520 CTGG---TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCG 175576 |||| |||| | ||||| ||||||||||| || |||||||| || | || | Sbjct 153977 CTGGGCTTGGTGGT---GGTAATGATGAGAGAGAACAGACCATTAATCAGCTCTTGACTG 153921 Query 175577 AGATGGATGGCTTT 175590 |||||||||| ||| Sbjct 153920 AGATGGATGGATTT 153907 >seq146110 Length=166024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| |||| ||||| || | | ||||| | |||||| || ||| ||||| Sbjct 154945 GCCATCGAAACCGTACCCTGCGTCGCCCGTAAGGCTCAGTGGGCACTGCGCTGGATTGAC 154886 Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 | ||| || || || ||||| || | || |||||||| || || ||||| ||| Sbjct 154885 GCC---TCTGAATCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTC 154829 Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175 |||||||| |||||||| || | ||| | |||||||| ||| | |||||||| || Sbjct 154828 TTCTCCGGCAGCTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTC 154769 Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || || || || || || || || ||||| |||||| || ||||| Sbjct 154768 ACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGC 154716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595457378009120