Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq44530 91.5 2e-13 seq127156 87.8 3e-12 seq124724 87.8 3e-12 seq86722 87.8 3e-12 seq98543 84.2 3e-11 >seq44530 Length=310530 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 155794 TTGTTTATAATAAAAATTTATGTAATAAAATGCAAATATTTATTAAAACATTGACTGGAA 155853 || ||| ||||| || || |||| | | |||| || || | ||||| | || || | Sbjct 41425 TTTTTTTTAATATAATTTG--GTAACAGA-TGCAGATCTTCGTCAAAACCCTCACAGGCA 41369 Query 155854 AAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATAC 155913 | || || || | || || || |||||||| || |||||||| ||| |||| Sbjct 41368 AGACCATCACCCTTGAGGTGGAGAGTTCTGATACCATCGACAACGTGAAGGCTAAGATAC 41309 Query 155914 AAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCG 155973 | || || || ||||| || || || |||||||| |||||| |||||| |||||||||| Sbjct 41308 AGGACAAGGAGGGCATCCCGCCGGATCAACAAAGGCTGATTTTTGCCGGAAAGCAGCTCG 41249 Query 155974 AAGATACCAGAACTTTATCAGATTATAATAT 156004 | ||| | |||| | | ||||| ||||| Sbjct 41248 AGGATGGCCGAACCCTTGCTGATTACAATAT 41218 >seq127156 Length=393785 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | ||||| | ||||||||||||||||| || || || || || Sbjct 285673 ATGCAGATATTTGTGAAAACTCTTACTGGAAAAACTATTACCTTGGAGGTGGAGAGCTCG 285732 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||||| || || ||||| || ||||| || || || || || Sbjct 285733 GACACAATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGGATTCCACCGGACCAG 285792 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || | || | ||||||||||||||| || ||| Sbjct 285793 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAGGAT 285828 >seq124724 Length=228683 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||| |||| ||| |||| | | || || || ||||| || | || || ||| |||| Sbjct 137068 ATGAAAATCTTTGTTAAGTCTCTTACCGGCAAGACTATCACCCTTGAGGTGGAAAGTTCT 137009 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||||| || || || ||||| |||||||| |||||||| ||| Sbjct 137008 GACACCATCGACAACGTGAATGCAAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAA 136949 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || ||| |||| | ||| ||||||||||| || ||| Sbjct 136948 CAGAGACTGATCTTTGCTGGTAAGCAGCTGGAGGAT 136913 >seq86722 Length=38260 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || || ||||| || |||| || ||| || Sbjct 14722 ATGCAGATCTTTGTGAAGACTCTCACCGGTAAGACTATCACCCTAGAGGTTGAAAGCTCA 14663 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct 14662 GACACCATCGACAACGTGAAGGCCAAAATTCAAGATAAAGAGGGCATCCCTCCAGATCAG 14603 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||||| ||||| | ||||| |||||||| || ||| Sbjct 14602 CAAAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGAT 14567 >seq98543 Length=260802 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | ||||| | ||||||||||| || ||| | ||||| || || Sbjct 26964 ATGCAGATATTTGTGAAAACCCTCACTGGAAAAACAATCACACTTGAAGTTGAGAGCTCC 27023 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || || |||||| |||||||| || || || || || || || Sbjct 27024 GACACTATTGACAATGTTAAGGCTAAAATCCAAGATAAGGAGGGGATTCCACCGGACCAG 27083 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | | |||| ||| ||||||||||| || ||| Sbjct 27084 CAGCGCCTCATTTTTGCTGGTAAGCAGCTTGAGGAT 27119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 730507525288400