Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq142522 95.1 2e-14 seq98543 95.1 2e-14 seq44588 95.1 2e-14 seq44530 95.1 2e-14 seq78903 91.5 3e-13 seq127156 86.0 1e-11 seq94009 86.0 1e-11 >seq142522 Length=12496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || |||||||| | ||| | ||| || || || ||||| | | Sbjct 3814 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 3755 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| || || ||||| |||||||| || || | ||||||||||||||| Sbjct 3754 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGCTGTTGATCAGGTGGA 3695 Query 192430 ATTCCTTCTTTATCTTG 192446 || ||||| || || || Sbjct 3694 ATGCCTTCCTTGTCCTG 3678 >seq98543 Length=260802 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | ||| | ||||| || || ||||| || || Sbjct 27193 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 27134 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || ||||||||||| || | | ||| || || ||| Sbjct 27133 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 27074 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| || ||||| |||| || || || Sbjct 27073 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 27014 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || ||||| ||||| | ||||| | |||||||||||| Sbjct 27013 ACTTCAAGTGTGATTGTTTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 26964 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | ||| | ||||| || || ||||| || || Sbjct 28705 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 28646 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || ||||||||||| || | | ||| || || ||| Sbjct 28645 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 28586 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| || ||||| |||| || || || Sbjct 28585 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 28526 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | ||||| | |||||||||||| Sbjct 28525 ACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 28476 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || | ||| | ||||| || || ||||| || || Sbjct 116311 ATGCCACCACGAAGACGGAGCACAAGATGAAGAGTAGATTCCTTCTGAATATTGTAGTCC 116252 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || ||||||||||| || | | ||| || || ||| Sbjct 116251 GCAAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAAATGAGGCGCTGCTGGTCCGGT 116192 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| || ||||| |||| || || || Sbjct 116191 GGAATCCCCTCCTTATCTTGGATTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTCTCA 116132 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | ||||| | |||||||||||| Sbjct 116131 ACTTCAAGTGTGATTGTCTTTCCAGTGAGGGTTTTCACAAATATCTGCAT 116082 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || || || | || | || | ||| | ||| || || ||||| || Sbjct 115627 ATACCACCCCTGAGCCGGAGAACAAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCT 115568 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| || |||| || | || || ||||||||||| || |||||||| || || Sbjct 115567 GCGAGTGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGTTGGTCCGGA 115508 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| || | || || || Sbjct 115507 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCA 115448 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| || || || || ||||| || || | || ||||||||| Sbjct 115447 ACTTCAAGAGTGATCGTCTTGCCGGTTAAGGTCTTCACGAAAATCTGCATT 115397 >seq44588 Length=1198 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | || |||||||| | ||| | ||| || || || ||||| | | Sbjct 490 CCACCTCTAAGCCTCAAAACTAAATGGAGAGTTGACTCCTTCTGAATGTTGTAATCTGCT 549 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| || || ||||| |||||||| || || | ||||||||||||||| Sbjct 550 AAGGTCCGACCATCTTCTAACTGTTTCCCAGCAAAAATCAAACGCTGTTGATCAGGTGGA 609 Query 192430 ATTCCTTCTTTATCTTG 192446 || ||||| || || || Sbjct 610 ATGCCTTCCTTGTCCTG 626 >seq44530 Length=310530 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| |||||||| | || | ||||| |||| || || ||| ||||||||| Sbjct 30773 ATACCACCCCTAAGACGAAGCACAAGATGTAGGGTAGATTCCTTCTGGATGTTATAATCA 30832 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||||| |||||||| || | || || || || || Sbjct 30833 GCAAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCAAATATCAGCCTTTGCTGGTCCGGG 30892 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || |||||| || || || ||||| || || || Sbjct 30893 GGAATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTGTCTATAGTGTCAGAGCTCTCC 30952 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | || || | |||||||||||| Sbjct 30953 ACCTCAAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACAAATATCTGCAT 31002 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | ||||| ||||| ||||| | ||||| ||||| || ||||| || || | Sbjct 30390 CATCCTCAAGCTGTTTTCCAGCGAAGATGAGCCTCTGCTGATCTGGCGGTATCCCCTCCT 30449 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || || || ||| || | ||||| || || || ||||| | Sbjct 30450 TGTCCTGGATCTTTGCCTTAACGTTATCAATTGTGTCTGAGCTCTCCACCTCAAGAGTGA 30509 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| | |||||| | |||||||||||| Sbjct 30510 TGGTTTTCCCAGTAAGTGTTTTCACAAATATCTGCAT 30546 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| || | || | || | ||||| || || ||||| || || Sbjct 30545 ATACCACCACGAAGGCGGAGCACCAGGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCT 30604 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| |||||| ||||||||||| || | || || || || Sbjct 30605 GCCAGGGTGCGGCCATCCTCCAGTTGTTTGCCAGCAAAGATCAACCGTTGCTGGTCTGGA 30664 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || ||||| ||| || ||| |||| ||| || || Sbjct 30665 GGGATGCCCTCCTTGTCCTGGATTTTGGCTTTCACGTTATCAATAGTATCAGAGCTCTCC 30724 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || ||||| || || | ||| || | |||||||||||| Sbjct 30725 ACCTCAAGGGTGATAGTTTTCCCCGTAAGTGTCTTCACAAATATCTGCAT 30774 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| |||||||| | || | |||| |||| || || |||||| |||||| Sbjct 31229 ATCCCACCCCTAAGACGAAGCACAAGGTGTAGGGTAGATTCCTTCTGGATATTGTAATCA 31288 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||||| |||| || | || || || |||||||| | ||||||||||| || Sbjct 31289 GCAAGGGTTCGGCCATCCTCTAGCTGCTTTCCGGCAAAGATCAGCCTCTGTTGATCCGGC 31348 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || ||||| ||| || || || || | ||| || || Sbjct 31349 GGGATGCCCTCCTTGTCCTGTATCTTAGCCTTCACGTTGTCGATGGTATCAGAACTCTCC 31408 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || || || | ||||| | || |||||||| Sbjct 31409 ACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTTTTGACGAAGATCTGCAT 31458 >seq78903 Length=243834 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| ||||| || | || | ||| | ||| | ||| || || || |||||| Sbjct 212837 ATCCCACCCCTAAGGCGGAGGACAAGATGGAGAGTGGACTCCTTCTGTATGTTGTAATCA 212896 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| || || ||||||||||| | |||||||||||| || Sbjct 212897 GCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGA 212956 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || || ||| || || || | || || ||| Sbjct 212957 GGAATGCCTTCCTTATCCTGGATCTTTGCTTTCACGTTGTCGATGGTGTCAGAGCTTTCC 213016 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || || | || |||| ||| |||||||| Sbjct 213017 ACCTCGAGGGTGATAGTCTTGCCGGTAAGAGTCTTAACAAAGATCTGCAT 213066 >seq127156 Length=393785 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || || || | || | ||| | ||| | ||| || || || |||||| Sbjct 285218 ATCCCACCCCTCAGGCGGAGGACAAGATGGAGAGTGGACTCCTTCTGTATGTTGTAATCA 285159 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| |||| || || ||||||||||| | |||||||||||| || Sbjct 285158 GCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGA 285099 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || || ||| || || || | || || ||| Sbjct 285098 GGAATGCCTTCCTTATCCTGGATCTTTGCTTTCACGTTGTCGATGGTGTCAGAGCTTTCC 285039 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || || | ||||||| ||| || ||||| Sbjct 285038 ACCTCGAGGGTGATAGTCTTGCCGGTAAGAGTTTTAACAAAGATTTGCAT 284989 >seq94009 Length=1666 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || |||||||| | || | || | |||| |||||| ||| || || || Sbjct 280 ATCCCTCCCCTAAGACGAAGAACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCG 221 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | || || | ||||| || || ||||| | ||||| ||||| ||| Sbjct 220 GAGAGCGTTCGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGATCCGGT 161 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| ||||| || |||||| || || || || | ||| || || Sbjct 160 GGGATTCCTTCCTTATCCTGGATTTTAGACTTAACGTTTTCAATCGTATCGGAGCTCTCC 101 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || || | || || | |||||||||||| Sbjct 100 ACGTCAAGGGTTATTGTCTTGCCGGTGAGGGTCTTGACAAATATCTGCAT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982598686716150