Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq120546 98.7 3e-15 seq133767 96.9 1e-14 seq57680 96.9 1e-14 >seq120546 Length=143997 Score = 98.7 bits (108), Expect = 3e-15 Identities = 220/321 (69%), Gaps = 12/321 (4%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| || ||||| |||||||| ||||| | || |||| | |||||| || | Sbjct 131990 ACCAATCGCGTCAATCTCGTCAATAAAAATTATACTTGGAGCACATTGTCTGGCTTCTTG 131931 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 ||| || | || | |||| || | ||||||| |||| || | || || ||| | Sbjct 131930 AAACAAGCTCCGGACCCTCGATGGCCCGACACCAACAAACATCTCCATGAAATCCGAACC 131871 Query 289149 GGATACTTGAATGAATGT-TACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || | || ||| | ||| | ||| |||||| ||| |||||||||| |||| Sbjct 131870 TGCTA-TCGATAGAAAGGGTACGCCAGATTCACCTGCTGTTGCTTTCGCCAGAAGAGTCT 131812 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCC--CTTTGGTACTTTT-GC-CCCAGCA 289263 |||| ||||| || || || || |||| | | |||||| | |||| || |||| | Sbjct 131811 TACCCGTTCCTGGAGGACC---TACAAGAAGTGCGCCTTTGGGAATTTTAGCACCCAACT 131755 Query 289264 GACTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGC 289322 ||| |||||||| ||| | |||| ||| | |||| ||| | ||| | ||| || Sbjct 131754 --CTTCATATTTCTTGGGGTTTTTTAGAAAATGAACAAACTCCATGATTTCTTCTTTAGC 131697 Query 289323 CTCATCACATCCTGCTACATC 289343 |||||||||||| || ||||| Sbjct 131696 CTCATCACATCCAGCCACATC 131676 >seq133767 Length=751646 Score = 96.9 bits (106), Expect = 1e-14 Identities = 284/427 (67%), Gaps = 13/427 (3%) Strand=Plus/Plus Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| ||| ||| |||||||| || |||| || || || |||||||| ||||||||| Sbjct 738313 TTTCCTTCAAAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCA 738372 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 || || || ||| ||||| | || |||| | ||||||||||| ||||| ||| Sbjct 738373 TT--CCCCCCTCCAAT-ACCCG--TTCCT-CTTTGCCTTCCAACAGCATCTATTTCATCA 738426 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108 | ||| | | ||| || | ||| | | | || ||| ||| | || | || || | Sbjct 738427 ACGAATACAATACAAGGTGCATTCTCTTTAGCCTTCTTGAAAAGA--TCACGAACCCGTG 738484 Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167 | || |||| ||||||| |||| || ||||| ||||| | || | | || | || | Sbjct 738485 AGGCGCCAACACCAACAAACATCTCCACAAACTCAGATCCTGAGA-TAGAGAAAAAGGGA 738543 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227 ||| ||||| || || | ||| | || || || ||||| || || ||||| || || Sbjct 738544 ACACCAGCTTCACCAGCAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCA 738603 Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287 | ||||| || || |||| ||||| ||| || | | || || |||| Sbjct 738604 ATGAGAAGAACACCTTTAGGTATACGAGCCCCGACAGCAGTAAACCTTTCTGGTTTCTTA 738663 Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCA 289347 | ||| || || | |||| | || | ||||| |||||| || || || ||| || Sbjct 738664 AGAAACTCCACTACTTCCATGAAATCCTGCTTTGCTTCATCAACCCCAGCAACGTCATCA 738723 Query 289348 AAAGTAA 289354 ||||||| Sbjct 738724 AAAGTAA 738730 Score = 93.3 bits (102), Expect = 1e-13 Identities = 283/427 (66%), Gaps = 13/427 (3%) Strand=Plus/Plus Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| ||| ||| |||||||| || |||| || || || |||||||| ||||||||| Sbjct 745374 TTTCCTTCAAAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCA 745433 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 || || || ||| ||||| | || |||| | ||||||||||| ||||| ||| Sbjct 745434 TT--CCCCCCTCCAAT-ACCCG--TTCCT-CTTTGCCTTCCAACAGCATCTATTTCATCA 745487 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108 | ||| | | ||| || | ||| | | | || ||| ||| | || | || || | Sbjct 745488 ACGAATACAATACAAGGTGCATTCTCTTTAGCCTTCTTGAAAAGA--TCACGAACCCGTG 745545 Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167 | || |||| ||||||| |||| || ||||| ||||| | || | | || | || | Sbjct 745546 AGGCGCCAACACCAACAAACATCTCCACAAACTCAGATCCTGAGA-TAGAGAAAAAGGGA 745604 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227 ||| ||||| || || | ||| | || || || ||||| || || ||||| || || Sbjct 745605 ACACCAGCTTCACCAGCAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCA 745664 Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287 | ||||| || || |||| || || ||| || | | || || |||| Sbjct 745665 ATGAGAAGAACACCTTTAGGTATACGAGCACCGACAGCAGTAAACCTTTCTGGTTTCTTA 745724 Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCA 289347 | ||| || || | |||| | || | ||||| |||||| || || || ||| || Sbjct 745725 AGAAACTCCACTACTTCCATGAAATCCTGCTTTGCTTCATCAACCCCAGCAACGTCATCA 745784 Query 289348 AAAGTAA 289354 ||||||| Sbjct 745785 AAAGTAA 745791 >seq57680 Length=1257 Score = 96.9 bits (106), Expect = 1e-14 Identities = 284/427 (67%), Gaps = 13/427 (3%) Strand=Plus/Minus Query 288932 TTTGCTT-AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| ||| ||| |||||||| || |||| || || || |||||||| ||||||||| Sbjct 1122 TTTCCTTCAAAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCA 1063 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 || || || ||| ||||| | || |||| | ||||||||||| ||||| ||| Sbjct 1062 TT--CCCCCCTCCAAT-ACCCG--TTCCT-CTTTGCCTTCCAACAGCATCTATTTCATCA 1009 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGG 289108 | ||| | | ||| || | ||| | | | || ||| ||| | || | || || | Sbjct 1008 ACGAATACAATACAAGGTGCATTCTCTTTAGCCTTCTTGAAAAGA--TCACGAACCCGTG 951 Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167 | || |||| ||||||| |||| || ||||| ||||| | || | | || | || | Sbjct 950 AGGCGCCAACACCAACAAACATCTCCACAAACTCAGATCCTGAGA-TAGAGAAAAAGGGA 892 Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227 ||| ||||| || || | ||| | || || || ||||| || || ||||| || || Sbjct 891 ACACCAGCTTCACCAGCAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCA 832 Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287 | ||||| || || |||| ||||| ||| || | | || || |||| Sbjct 831 ATGAGAAGAACACCTTTAGGTATACGAGCCCCGACAGCAGTAAACCTTTCTGGTTTCTTA 772 Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCA 289347 | ||| || || | |||| | || | ||||| |||||| || || || ||| || Sbjct 771 AGAAACTCCACTACTTCCATGAAATCCTGCTTTGCTTCATCAACCCCAGCAACGTCATCA 712 Query 289348 AAAGTAA 289354 ||||||| Sbjct 711 AAAGTAA 705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469004998421213