Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021788.1 Length=145865 Score E Sequences producing significant alignments: (Bits) Value seq117079 86.0 6e-12 seq148459 84.2 2e-11 seq103852 84.2 2e-11 >seq117079 Length=3689 Score = 86.0 bits (94), Expect = 6e-12 Identities = 81/102 (79%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 89637 TGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGA 89696 |||||| ||||||||||||||||||| | || |||| | ||||||| ||||||||| Sbjct 2990 TGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGA 2931 Query 89697 GTCCTGACTAGGCCACAGCATAAATAATAATTAATATATTTG 89738 | |||| | |||||| || |||||| | || ||||||||| Sbjct 2930 GACCTGCATGGGCCACTGCTGAAATAA-ATTTTATATATTTG 2890 >seq148459 Length=97672 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 89637 TGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGA 89696 |||||| ||||||||||||||||||| | || |||| | ||||||| ||||||||| Sbjct 15058 TGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGA 14999 Query 89697 GTCCTGACTAGGCCACAGCATAAATAATAATTAATATATTT 89737 | |||| | ||||||| ||||| | || || |||||||| Sbjct 14998 GACCTGCATGGGCCACAACATAAGT-ATTTTTTATATATTT 14959 >seq103852 Length=471151 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 89637 TGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGA 89696 |||||| ||||||||||||||||||| | || |||| | ||||||| ||||||||| Sbjct 25679 TGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGA 25738 Query 89697 GTCCTGACTAGGCCACAGCATAAATAATAATTAATATATTT 89737 | |||| | |||||| | ||||||| || |||||||| Sbjct 25739 GACCTGCATGGGCCACTGTTGAAATAATTTTTTATATATTT 25779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465770013883000