Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq148459 89.7 5e-13 seq148425 82.4 7e-11 seq117079 82.4 7e-11 >seq148459 Length=97672 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 89903 TGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGA 89962 |||||| ||||||||||||||||||| | || |||| | ||||||| ||||||||| Sbjct 15058 TGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGA 14999 Query 89963 GTCCTGACTAGGCCACAACATAAATAATAATTAATATATTT 90003 | |||| | ||||||||||||| | || || |||||||| Sbjct 14998 GACCTGCATGGGCCACAACATAAGT-ATTTTTTATATATTT 14959 >seq148425 Length=288697 Score = 82.4 bits (90), Expect = 7e-11 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 89904 GGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGAG 89963 ||||| ||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 181817 GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAG 181876 Query 89964 TCCTGACTAGGCCACAACATAAATAATAATTAATATATTT 90003 |||| | ||||| ||| ||||| ||||| ||| |||| Sbjct 181877 ACCTGCATGGGCCAGAAC-TAAATTATAATAAATTAATTT 181915 Score = 82.4 bits (90), Expect = 7e-11 Identities = 79/100 (79%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 89904 GGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGAG 89963 ||||| ||||||||||||||||||| | || |||| | ||||||| |||||||||| Sbjct 183935 GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAG 183994 Query 89964 TCCTGACTAGGCCACAACATAAATAATAATTAATATATTT 90003 |||| | ||||| ||| ||||| ||||| ||| |||| Sbjct 183995 ACCTGCATGGGCCAAAAC-TAAATTATAATAAATTAATTT 184033 >seq117079 Length=3689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/102 (78%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 89903 TGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGA 89962 |||||| ||||||||||||||||||| | || |||| | ||||||| ||||||||| Sbjct 2990 TGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGA 2931 Query 89963 GTCCTGACTAGGCCACAACATAAATAATAATTAATATATTTG 90004 | |||| | |||||| | |||||| | || ||||||||| Sbjct 2930 GACCTGCATGGGCCACTGCTGAAATAA-ATTTTATATATTTG 2890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464102728114120