Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq146110 174 2e-37 seq148002 140 4e-27 >seq146110 Length=166024 Score = 174 bits (192), Expect = 2e-37 Identities = 221/299 (74%), Gaps = 9/299 (3%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| ||||| |||||||||||||||||||| || || || | | |||| | | ||| Sbjct 155177 GAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAGAAAGCGCGCGCCTCCGGAAGTTGA 155236 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||||| || ||||| |||||||| |||||| || || |||||||| Sbjct 155237 ACCTCTCGCATGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCATCAGAAGCGGCGAAG 155296 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCG---ACACCCAGTG- 869808 || |||||||||| ||||||||||||||||||| | |||| | |||| || Sbjct 155297 AAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGGTGTGATCCCATTGC 155356 Query 869809 -GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || || | | ||| || ||||| || || ||||||| |||||||| || || | Sbjct 155357 CGAACGTCTTG--TGAGAGATCGACCTCTTCCGCAGTCCAGAAAGAGGCCTCTGCTTTCT 155414 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACA-AAGCGGTTGGGGTT 869925 ||||||||||||| | || |||||||||| ||||| | ||| ||||| | |||||| Sbjct 155415 TGTACATCTCCCAAATCTGAGGGTAGCGGATCGGGAACA-TACAGAAGCGATCGGGGTT 155472 Score = 123 bits (136), Expect = 3e-22 Identities = 168/230 (73%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 869701 CATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAG 869760 |||||| || ||||| || |||||| |||||| || ||| |||||||| || || || Sbjct 155524 CATGAAGCGTCCGGCGAGATTCTCGAGCACGATACCATCGGAAGCGGCGAAGAAGGCTAG 155583 Query 869761 GACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC--GACA-CCCAGTG--GACGGTG 869815 |||| ||||||||||||||||||| | |||| | | |||| || || || Sbjct 155584 AACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGATGTGATCCCATTGCCGAACGTC 155643 Query 869816 TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATC 869875 | | ||| || ||||| || || ||||||| |||||||| || |||||||||||| Sbjct 155644 TTGTGA--GAGATCGACCTCTTCCGCAGTCCAGAAGGAGGCCTCTGCTTTTTTGTACATC 155701 Query 869876 TCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTT 869925 ||||| | || |||||||||| ||||| | | ||||| | |||||| Sbjct 155702 TCCCAAATCTGAGGGTAGCGGATCGGGAACATGCAGAAGCGATCGGGGTT 155751 Score = 122 bits (134), Expect = 1e-21 Identities = 187/266 (70%), Gaps = 8/266 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| ||| ||| | ||||| ||| | ||| || ||||| | ||||||||| Sbjct 154734 CCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCTGGCATCAAACCGCGCTTC 154793 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||| ||||| || || || |||||| ||||| Sbjct 154794 TTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATACCTTCGACGCACGCAAAA 154853 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTC-GAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| | |||||| ||||| | || ||||| || ||||| || ||||| Sbjct 154854 GCGAGAATCCGCTCAGCAAATGATTCAGAGGC-------GTCAATCCAGCGCAGTGCCCA 154906 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 | ||||| || | || || || |||||||||||||| || | | ||||| Sbjct 154907 CTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGAAAAAGATTGGATTTTTC 154966 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGA 869444 || | |||||||| ||||| |||| Sbjct 154967 GGTGGAGTCCTTGATGTAGGTCTCGA 154992 >seq148002 Length=1402447 Score = 140 bits (154), Expect = 4e-27 Identities = 203/282 (72%), Gaps = 5/282 (2%) Strand=Plus/Minus Query 869641 GTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTT 869700 ||| |||||||||||||| || || || || || | | |||| | | || |||||| Sbjct 225421 GTTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAGCTGTACCTCCCG 225362 Query 869701 CATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAG 869760 |||||| ||||| || |||||||| ||||| |||||| |||||||| ||||| || Sbjct 225361 CATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGCGAAGAAAGCGAG 225302 Query 869761 GACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGA--CA-CCCAGTGGACGGTG-T 869816 ||||| | | || || || |||||| | |||| || || ||||||| ||| | | Sbjct 225301 AACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCAGTGG-CGGAGAT 225243 Query 869817 CGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCT 869876 | | || || || || || || ||||||| ||||| ||||| || |||||||||| Sbjct 225242 CTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATCT 225183 Query 869877 CCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918 |||| | || |||||||||| || || | | ||||||| Sbjct 225182 CCCAGATCTGAGGGTAGCGGATCGGAAACATGCAGAAGCGGT 225141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6094899334595233