Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq146110 163 4e-34 seq148002 123 4e-22 seq43241 104 4e-16 seq15495 104 4e-16 >seq146110 Length=166024 Score = 163 bits (180), Expect = 4e-34 Identities = 190/254 (75%), Gaps = 7/254 (3%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || | ||| ||||| ||||||||| ||||| |||||||| |||||| || Sbjct 155222 GCCTCCGGAAGTTGAACCTCTCGCATGAAGCGTCCGGCGAGGTTCTCCAGCACGATACCA 155281 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| ||||| ||||||| |||||||||| |||||||| | |||| Sbjct 155282 TCAGAAGCGGCGAAGAAGGCCAGGACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGG 155341 Query 796270 GAGA---CCCAGTG--GACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGG 796324 | | |||| || || ||| | | ||| |||||||| || || ||||| || | Sbjct 155342 GTGTGATCCCATTGCCGAACGTCTTGTGA--GAGATCGACCTCTTCCGCAGTCCAGAAAG 155399 Query 796325 AGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAA 796384 ||||||| || || |||||||||||||| ||| | |||||||||| ||||||| | | Sbjct 155400 AGGCCTCTGCTTTCTTGTACATCTCCCAAATCTGAGGGTAGCGGATCGGGAACATACAGA 155459 Query 796385 AGCGATTGGGGTTC 796398 |||||| ||||||| Sbjct 155460 AGCGATCGGGGTTC 155473 Score = 152 bits (168), Expect = 8e-31 Identities = 175/231 (76%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 796173 CATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAG 796232 ||||||||| ||||| || ||||| |||||| || ||| |||||||| ||||| || Sbjct 155524 CATGAAGCGTCCGGCGAGATTCTCGAGCACGATACCATCGGAAGCGGCGAAGAAGGCTAG 155583 Query 796233 GACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC--GAGA-CCCAGTG--GACCGTG 796287 |||| |||||||||| |||||||| | |||| | || |||| || || ||| Sbjct 155584 AACGTAGGTGATAAAGTGGCGCTCGTCAGAGGTGAGGATGTGATCCCATTGCCGAACGTC 155643 Query 796288 TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATC 796347 | | ||| |||||||| || || ||||| ||||||||||| || |||||||||||| Sbjct 155644 TTGTGA--GAGATCGACCTCTTCCGCAGTCCAGAAGGAGGCCTCTGCTTTTTTGTACATC 155701 Query 796348 TCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTC 796398 ||||| ||| | |||||||||| ||||||| ||||||| ||||||| Sbjct 155702 TCCCAAATCTGAGGGTAGCGGATCGGGAACATGCAGAAGCGATCGGGGTTC 155752 Score = 136 bits (150), Expect = 6e-26 Identities = 213/304 (70%), Gaps = 8/304 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| ||| ||| | ||||| ||| ||| || ||||| | ||||||||| Sbjct 154734 CCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGACCTGGCATCAAACCGCGCTTC 154793 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||||| ||||| ||||| || || || |||||| ||||| Sbjct 154794 TTGAGCCAGAAGATGGCGCAGAAGCTGCCGGAGAAGAAAATACCTTCGACGCACGCAAAA 154853 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTC-CAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||| | |||||| ||||| | || |||| || ||||| || ||||| Sbjct 154854 GCGAGAATCCGCTCAGCAAATGATTCAGAGGC-------GTCAATCCAGCGCAGTGCCCA 154906 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| || |||| || || |||||||||||||| || | | || || Sbjct 154907 CTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGAAAAAGATTGGATTTTTC 154966 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | |||||||| |||||| |||| ||| || || |||| ||||| |||||||| Sbjct 154967 GGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATACATCTCGGAGTGAATGTTTTC 155026 Query 794640 GATG 794643 |||| Sbjct 155027 GATG 155030 Score = 96.9 bits (106), Expect = 5e-14 Identities = 97/125 (78%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 794542 GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTG 794601 || || || |||||||||||||| || | | || || | |||||||| |||||| Sbjct 155093 GGTACGGTTTCGATGGCGCGAAAAAGATTGGATTTTTCAGTGGAGTCCTTGATGTAGGTC 155152 Query 794602 TCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATA- 794660 |||| ||| || || |||| ||||| ||||||||||||||||||||||||||||| Sbjct 155153 TCGAGGAGAAGACTATACATCTCGGAGTGAATGTTTTCGATGGCGATCTGGAAGCCATAG 155212 Query 794661 AAAGC 794665 ||||| Sbjct 155213 AAAGC 155217 >seq148002 Length=1402447 Score = 123 bits (136), Expect = 4e-22 Identities = 169/233 (73%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || | || |||||| |||||||||||| || |||||||| ||||| ||| Sbjct 225384 GCCTCCGGGAGCTGTACCTCCCGCATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCG 225325 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| || ||||| ||||| | | || || || |||||| | |||| Sbjct 225324 TCGGAAGCGGCGAAGAAAGCGAGAACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGG 225265 Query 796270 GAGAC---CCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | ||||||| | | | || | || || || || || || ||||| || || Sbjct 225264 GATTCATTCCAGTGG-CGGAGATCTTGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGA 225206 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| ||||| || |||||||||||||| ||| | |||||||||| || |||| Sbjct 225205 GGCTTCGGCTTTCTTGTACATCTCCCAGATCTGAGGGTAGCGGATCGGAAACA 225153 >seq43241 Length=180398 Score = 104 bits (114), Expect = 4e-16 Identities = 172/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || ||||| || ||||| || || || || | || || || ||| | | Sbjct 33389 TGAACTTGGTAACCGCCTTAGTGCCCTCCGACACCGCATGTTTTGCAAGCTCTCCGGGAA 33330 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG- 1485588 | || || |||| |||||||||||||||| ||| || || |||| |||||| Sbjct 33329 GAACCAAACGAACGGAAGTCTGGATCTCGCGGGAAGTGATGGT--TG-GCTTCTTAGTGT 33273 Query 1485589 --CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGG-TCGATCATGTCGTTGACAAACGAG 1485645 || || ||||| || ||| ||| | || || | || ||||||| |||||| Sbjct 33272 ATCGAGCAAGGCGTGAGGACTCC-TGCGCAAGCTTCTCAAAGATATCGTTGATGAACGAG 33214 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||||||| ||||| ||| | ||||| || | || |||||||||||||| | |||| Sbjct 33213 TTCATGATGCTCATCGCCTTGCTTGAGATACCGATATCAGGGTGCACCTGCTTCAACACC 33154 Query 1485706 TTG 1485708 ||| Sbjct 33153 TTG 33151 >seq15495 Length=4842 Score = 104 bits (114), Expect = 4e-16 Identities = 172/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || ||||| || ||||| || || || || | || || || ||| | | Sbjct 2891 TGAACTTGGTAACCGCCTTAGTGCCCTCCGACACCGCATGTTTTGCAAGCTCTCCGGGAA 2950 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTG- 1485588 | || || |||| |||||||||||||||| ||| || || |||| |||||| Sbjct 2951 GAACCAAACGAACGGAAGTCTGGATCTCGCGGGAAGTGATGGT--TG-GCTTCTTAGTGT 3007 Query 1485589 --CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGG-TCGATCATGTCGTTGACAAACGAG 1485645 || || ||||| || ||| ||| | || || | || ||||||| |||||| Sbjct 3008 ATCGAGCAAGGCGTGAGGACTCC-TGCGCAAGCTTCTCAAAGATATCGTTGATGAACGAG 3066 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||||||| ||||| ||| | ||||| || | || |||||||||||||| | |||| Sbjct 3067 TTCATGATGCTCATCGCCTTGCTTGAGATACCGATATCAGGGTGCACCTGCTTCAACACC 3126 Query 1485706 TTG 1485708 ||| Sbjct 3127 TTG 3129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7900380740601411