Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq147506 98.7 4e-16 seq93847 98.7 4e-16 seq104867 87.8 7e-13 seq148883 82.4 3e-11 seq126344 82.4 3e-11 >seq147506 Length=118584 Score = 98.7 bits (108), Expect = 4e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 66843 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 66902 Query 50170 CTGCTCTACTCCGC 50183 |||||||||||||| Sbjct 66903 CTGCTCTACTCCGC 66916 >seq93847 Length=9265 Score = 98.7 bits (108), Expect = 4e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 1796 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 1737 Query 50170 CTGCTCTACTCCGC 50183 |||||||||||||| Sbjct 1736 CTGCTCTACTCCGC 1723 >seq104867 Length=862580 Score = 87.8 bits (96), Expect = 7e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| ||||||||||||| | |||| ||| ||||||||| || ||||||| ||| Sbjct 798626 TTGCGGAGATAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCAAGCTACCAAAC 798567 Query 50171 TGCTCTACTCCGC 50183 ||||||||||||| Sbjct 798566 TGCTCTACTCCGC 798554 Score = 86.0 bits (94), Expect = 2e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 50115 GGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCT 50174 |||| | ||||||||||||| | |||||||| |||||||| |||||||||| ||||||| Sbjct 826260 GGAGACAGGATTTGAACCCGTGACCTCCAGGTCATGAGCCTTGCGAGCTACCAAACTGCT 826201 Query 50175 CTACTCCGCA 50184 ||||||| || Sbjct 826200 CTACTCCACA 826191 Score = 82.4 bits (90), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 ||| |||| ||||||||||||| | |||| ||| ||||||||| || ||||||| ||| Sbjct 823855 TTGTGGAGATAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCAAGCTACCAAAC 823914 Query 50171 TGCTCTACTCCGC 50183 ||||||||||||| Sbjct 823915 TGCTCTACTCCGC 823927 >seq148883 Length=425957 Score = 82.4 bits (90), Expect = 3e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||| ||| | || ||||| || Sbjct 400133 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAACCTTGTGATCTACCAAA 400192 Query 50170 CTGCTCTACTCCGCA 50184 |||||||||||| || Sbjct 400193 CTGCTCTACTCCTCA 400207 >seq126344 Length=57221 Score = 82.4 bits (90), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| |||||||||| || | |||| ||| ||||||||| | |||||||| ||| Sbjct 5704 TTGCGGAGATAGGATTTGAACTCGTGACCTCAAGGTTATGAGCCTTGTGAGCTACCAAAC 5763 Query 50171 TGCTCTACTCCGC 50183 ||||||||||||| Sbjct 5764 TGCTCTACTCCGC 5776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181281554513838