Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq14166 100 2e-16 seq94009 98.7 7e-16 seq59128 96.9 2e-15 seq127156 91.5 1e-13 seq98543 87.8 1e-12 seq78903 86.0 4e-12 seq93447 84.2 1e-11 >seq14166 Length=498497 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||| ||| || ||| |||| || | || || ||||| || Sbjct 8640 TCCTTCTGAATATTGTAATCGGCGAGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCGAAG 8581 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || || |||||||||||| | || | || || ||||| ||| ||| | || ||| | Sbjct 8580 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTT 8522 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||| || ||||| || | ||||| || ||||| |||| ||||| || Sbjct 8521 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGAC 8462 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 8461 GAAGATCTGCAT 8450 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||| ||| || || |||| || | || || ||||| || Sbjct 11644 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAG 11585 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || || |||||||||||| | || | || || ||||| ||| ||| | || ||| | Sbjct 11584 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTT 11526 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||| || ||||| || | ||||| || || || |||| ||||| || Sbjct 11525 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTGAC 11466 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 11465 GAAGATCTGCAT 11454 >seq94009 Length=1666 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || |||||||| |||||||| || || |||| || | |||||||||||||| Sbjct 698 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGTTTTCCGGCAAA 639 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAAC-A 33676 ||||| | |||||| || | || | || |||||||| ||||| || | ||| | Sbjct 638 AATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCTTTGTCCTGGATTTT-TGACTTAACGA 580 Query 33677 TAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 | | ||||||| |||||||| | || || || || || || | ||||| | Sbjct 579 TTTCGATGGTGTCGGAACTCTCCACGTCGAGAGTAATGGTCTTGCCAGTGAGGGTTTTGA 520 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 519 CAAAGATCTGCAT 507 >seq59128 Length=96712 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||| ||| || || |||| || | || || ||||| || Sbjct 40034 TCCTTCTGAATATTGTAATCGGCGAGGGTACGGCCGTCCTCAAGCTGCTTCCCGGCGAAG 39975 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || || |||||||||||| | || | || || ||||| ||| ||| | || ||| | Sbjct 39974 ATTAAGCGCTGCTGATCTGGTGGAATGCCCTCCTTGTCCTGAATCTTC-GCTTTAACGTT 39916 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||||| || ||||| || | ||||| || ||||| |||| ||||| || Sbjct 39915 GTCGATCGTGTCCGAGGACTCCACCTCGAGGGTGATTGTCTTACCCGTTAGGGTTTTGAC 39856 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 39855 GAAGATCTGCAT 39844 >seq127156 Length=393785 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| || | || | ||| |||||| ||| || |||||||||||||| | Sbjct 285215 CCACCCCTCAGGCGGAGGACAAGATGGAGAGTGGACTCCTTCTGTATGTTGTAATCAGCA 285156 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | ||| |||||| | || Sbjct 285155 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGA 285096 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | ||||| || || || || || || || | ||| | |||||| ||| ||| Sbjct 285095 ATGCCTTCCTTATCCTGGATCTT-TGCTTTCACGTTGTCGATGGTGTCAGAGCT---TTC 285040 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | ||||| || || || || | ||||| |||||||| ||||| Sbjct 285039 CACCTCGAGGGTGATAGTCTTGCCGGTAAGAGTTTTAACAAAGATTTGCAT 284989 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| | || | ||| ||||| ||| ||||| |||||||| |||| Sbjct 284987 CCTCCCCGCAGACGGAGAACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCGGCA 284928 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || || || ||||||||||| | |||||||| | || Sbjct 284927 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAAATCAACCTTTGCTGATCCGGTGGG 284868 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | ||| || ||||| ||||| | | ||| | ||| | ||| || ||| ||| Sbjct 284867 ATACCCTCCTTGTCCTGGATTTT-GGCCTTAACGTTGTCGATGGTATCAGAGCT---TTC 284812 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | |||||||| || || || | || || || ||||||||||| Sbjct 284811 CACCTCGAGGGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 284761 >seq98543 Length=260802 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | || ||||| | ||| || || ||| ||||| ||||| ||||| | Sbjct 115853 ACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTTTGAATGTTATAATCTGC 115794 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || || |||||||| || | ||||| || | || Sbjct 115793 AAGGGTGCGGCCGTCCTCAAGCTGCTTCCCAGCAAAAATTAACCTTTGCTGGTCCGGAGG 115734 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| ||| | ||||||| || | Sbjct 115733 AATGCCTTCTTTGTCCTGGATCTT-GGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAA 115675 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| ||||| |||| || || ||||| ||||||||| Sbjct 115674 CTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCATA 115625 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | || ||||| | ||| || || ||| || || ||||| ||||| | Sbjct 23968 ACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGC 23909 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || |||||||| || | |||||| || | || Sbjct 23908 AAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGG 23849 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| ||| | ||||||| || | Sbjct 23848 AATGCCTTCTTTGTCCTGGATCTT-GGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAA 23790 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| ||||| |||| || || ||||| ||||||||| Sbjct 23789 CTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCATA 23740 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || || | || ||||| | ||| || || ||| || || ||||| ||||| | Sbjct 26735 ACCTCCCCTGAGTCGCAACACAAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCTGC 26676 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || | || || || |||||||| || | |||||| || | || Sbjct 26675 AAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGAGG 26616 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || || | | |||| ||| | ||||||| || | Sbjct 26615 AATGCCTTCTTTGTCCTGGATCTT-GGCCTTGACATTGTCTATGGTGTCGGAGCTCTCAA 26557 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| ||||| |||| || || ||||| ||||||||| Sbjct 26556 CTTCAAGAGTGATCGTCTTACCAGTTAGGGTCTTCACAAAAATCTGCATA 26507 >seq78903 Length=243834 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | || | || | ||| |||||| ||| || |||||||||||||| | Sbjct 212840 CCACCCCTAAGGCGGAGGACAAGATGGAGAGTGGACTCCTTCTGTATGTTGTAATCAGCA 212899 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | ||| |||||| | || Sbjct 212900 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGA 212959 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | ||||| || || || || || || || | ||| | |||||| ||| ||| Sbjct 212960 ATGCCTTCCTTATCCTGGATCTT-TGCTTTCACGTTGTCGATGGTGTCAGAGCT---TTC 213015 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | ||||| || || || || | || || |||||||||||||| Sbjct 213016 CACCTCGAGGGTGATAGTCTTGCCGGTAAGAGTCTTAACAAAGATCTGCAT 213066 >seq93447 Length=80558 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || || || || || | || |||||| | || || | || |||||||| || Sbjct 27713 CTCCTTCTGGATATTATAGTCAGCTAGAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 27654 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | || ||||| || | || | ||||| ||||| || || || ||| | Sbjct 27653 GATAAGGCGTTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT-AACGT 27595 Query 33678 AGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 |||| ||||||| ||| ||||| || | |||||||| || || ||||| ||||||| Sbjct 27594 TGTCAATGGTGTCGGATGACTCCACCTCCAGGGTGATCGTCTTCCCCGTTAAGGTTTTTA 27535 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 27534 CGAAGATCTGCAT 27522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328106497174080