Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq122030 127 3e-24 seq39102 127 3e-24 seq146607 111 2e-19 seq37047 111 2e-19 seq146110 84.2 3e-11 >seq122030 Length=308131 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| ||||| |||||||| || ||||||||||| || | ||||| Sbjct 210806 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 210865 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||| |||| ||| || || || ||||| | |||||| ||||| || || | |||||| Sbjct 210866 GTAGGTTTTAATGGCAGAATCAATATCTTCATTATGAATCCCTATAGCAACTCTCATCAA 210925 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||||||||| || | ||| ||| ||| | || ||| || || || || |||| || Sbjct 210926 CATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTTTCGAG 210985 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||||||| ||||| || | || |||||||| || ||||| || Sbjct 210986 AGTTTTAAAACCAAAGTAATCATAATCGAAGTCTCTATCATAAATGAT 211033 Score = 105 bits (116), Expect = 9e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | ||||| | ||| | || | ||||| |||| | ||| Sbjct 210254 TCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGTAGCATTGGAACTACACC 210313 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| || |||||| || ||| |||| ||||| || | || ||||| || ||| || Sbjct 210314 ATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCACGAATGTTGTGAATGGA 210373 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| ||||| || || ||| |||| ||| || |||||| || |||||||| Sbjct 210374 GACACCAATTCCGCCAGCAGATTTGCTTATTATAGCGCACTCTTTCAAGGTATCATATAT 210433 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| ||||| || || || |||||| Sbjct 210434 TCCTTCAATGCTATCATCTTTCATGCAAATGAGGAAGCAGCTA 210476 >seq39102 Length=2222 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| ||||| |||||||| || ||||||||||| || | ||||| Sbjct 645 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 586 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||| |||| ||| || || || ||||| | |||||| ||||| || || | |||||| Sbjct 585 GTAGGTTTTAATGGCAGAATCAATATCTTCATTATGAATCCCTATAGCAACTCTCATCAA 526 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||||||||| || | ||| ||| ||| | || ||| || || || || | || || Sbjct 525 CATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGAG 466 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||||||| ||||| || | || ||||||||| || ||||| || Sbjct 465 AGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 418 Score = 105 bits (116), Expect = 9e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | || | ||||| | ||| | || | ||||| |||| | ||| Sbjct 1197 TCCTCCTTGATCAACATACCGAGCAGTATCATTGAAAACCCGTAGCATTGGAACTACACC 1138 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| || |||||| || ||| |||| ||||| || | || ||||| || ||| || Sbjct 1137 ATTCGAAACACCATTCGTCCCACAAATGTAACTCCCAGTCGCACGAATGTTGTGAATGGA 1078 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| ||||| || || ||| |||| ||| || |||||| || |||||||| Sbjct 1077 GACACCAATTCCGCCAGCAGATTTGCTTATTATAGCGCACTCTTTCAAGGTATCATATAT 1018 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| ||||| || || || |||||| Sbjct 1017 TCCTTCAATGCTATCATCTTTCATGCAAATGAGGAAGCAGCTA 975 >seq146607 Length=192245 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || || ||||| | |||| || |||| |||| | || | || ||| |||| ||| ||| Sbjct 52478 CCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCCA 52419 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || || | ||||| |||||| |||||||||||| | || ||||| ||| || ||| Sbjct 52418 TTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGAG 52359 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || || || | ||||| |||| ||| |||||||| Sbjct 52358 ACACCAATTCCTCCAGCAGACTTGCTTATAACTGCACACTCCTTCAGTGTATCATATATC 52299 Query 69931 CCCTCTATGCTATCATCTATCATG 69954 || || |||||||||||| ||||| Sbjct 52298 CCATCAATGCTATCATCTTTCATG 52275 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||| ||||||| | ||| || | | || |||||||||||| |||| |||| || Sbjct 54025 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 53966 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||| || ||||| || | |||||||| | |||| | || |||| || ||| || Sbjct 53965 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 53906 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||||||||||| || || ||| |||||||||| ||||| ||| || Sbjct 53905 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 53855 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||| ||||||| | ||| || | | || |||||||||||| |||| |||| || Sbjct 55607 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 55548 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||| || ||||| || | |||||||| | |||| | || |||| || ||| || Sbjct 55547 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 55488 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||||||||||| || || ||| |||||||||| ||||| ||| || Sbjct 55487 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 55437 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || || ||||| | |||| || |||| |||| | || | || ||| |||| ||| ||| Sbjct 47792 CCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCCA 47733 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || || | ||||| |||||| |||||||||||| | || ||||| ||| || ||| Sbjct 47732 TTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGAG 47673 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || || || | || || |||| ||| |||||||| Sbjct 47672 ACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATATC 47613 Query 69931 CCCTCTATGCTATCATCTATCATG 69954 || || |||||||||||| ||||| Sbjct 47612 CCATCAATGCTATCATCTTTCATG 47589 >seq37047 Length=1246 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||| ||||||| | ||| || | | || |||||||||||| |||| |||| || Sbjct 1168 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 1109 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||| || ||||| || | |||||||| | |||| | || |||| || ||| || Sbjct 1108 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 1049 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||||||||||| || || ||| |||||||||| ||||| ||| || Sbjct 1048 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 998 >seq146110 Length=166024 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || || || ||||| || | | || | ||||||||||| ||||| Sbjct 154712 GCATGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAG 154771 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734 || ||||| | ||| ||||| |||||||| || ||||| ||| ||| | || || |||| Sbjct 154772 ACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATGGC-GCAGAAGCTGCCGGAGAAGA 154830 Query 39735 AGATGCCTTCTAC 39747 | || ||||| || Sbjct 154831 AAATACCTTCGAC 154843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685628152992360