Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq146110 95.1 4e-14 >seq146110 Length=166024 Score = 95.1 bits (104), Expect = 4e-14 Identities = 117/156 (75%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 443716 TCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 |||||||||| ||| |||||||| | || || ||||||||| || |||||||||| Sbjct 154857 TCGCTTTTGC-GTGCGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTGCG-CCATCTTCTG 154800 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | | || ||||| || | |||| ||||| || ||| |||||| || ||| ||| || Sbjct 154799 GCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGA 154740 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTA 443870 |||||| | || |||||||| || || ||||| || Sbjct 154739 CGAGGGACTCCACTGCGACTTTGCATGCCTTCTGTA 154704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1585300735072305