Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq133767 161 1e-34 seq57680 161 1e-34 seq146110 150 2e-31 seq124605 98.7 1e-15 >seq133767 Length=751646 Score = 161 bits (178), Expect = 1e-34 Identities = 295/423 (70%), Gaps = 12/423 (3%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9613 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 738264 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 738321 Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 738322 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 738381 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 | ||| | | | |||| |||| || ||||| || ||||||| ||| || || || Sbjct 738382 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 738441 Query 9734 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 ||| ||| || || | ||| ||| ||||| || || || |||||| |||||||| Sbjct 738442 GGTGCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAAC 738500 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||||||||| | | | | | || | || ||||| ||| || |||||| | Sbjct 738501 AAACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAG 738559 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 9911 ||||||| ||| || |||||||| || ||||| || ||| ||| || ||||| Sbjct 738560 CAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCAATGAGAAGAACACCTT 738619 Query 9912 GTGGAATCTTGGCGCCACTTCCAAAGT--ATCTCTCAGGTTGCTTAAGAAAATCCACAAT 9969 || | | | ||| | | ||| | || || |||| ||||||||| ||||| | Sbjct 738620 TAGG--TATACGAGCCCCGACAGCAGTAAACCTTTCTGGTTTCTTAAGAAACTCCACTAC 738677 Query 9970 TTC 9972 ||| Sbjct 738678 TTC 738680 Score = 159 bits (176), Expect = 4e-34 Identities = 242/337 (72%), Gaps = 8/337 (2%) Strand=Plus/Plus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9613 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 745325 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 745382 Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 745383 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 745442 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 | ||| | | | |||| |||| || ||||| || ||||||| ||| || || || Sbjct 745443 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 745502 Query 9734 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 ||| ||| || || | ||| ||| ||||| || || || |||||| |||||||| Sbjct 745503 GGTGCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAAC 745561 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||||||||| | | | | | || | || ||||| ||| || |||||| | Sbjct 745562 AAACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAG 745620 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 ||||||| ||| || |||||||| || ||||| || Sbjct 745621 CAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGG 745657 >seq57680 Length=1257 Score = 161 bits (178), Expect = 1e-34 Identities = 295/423 (70%), Gaps = 12/423 (3%) Strand=Plus/Minus Query 9556 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCA 9613 ||| ||||| || |||| || || || || | || | |||||||| ||| || || Sbjct 1171 ATCCAGGATGTCTGCGCGGTTAGTAGCTGCAAGAACTATGATACCTGTATTTCCTT--CA 1114 Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||||||||| || |||||||| ||||| | ||||||||| | |||||||||| | Sbjct 1113 AAACCATCCATTTCAGTCAAAAGCTGGTTCAGAGTTTGTTCTCTTTCATCATTCCCCCCT 1054 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 9733 | ||| | | | |||| |||| || ||||| || ||||||| ||| || || || Sbjct 1053 CCAATACCCGTTCCTCTTTGCCTTCCAACAGCATCTATTTCATCAACGAATACAATACAA 994 Query 9734 GGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 ||| ||| || || | ||| ||| ||||| || || || |||||| |||||||| Sbjct 993 GGTGCATTCTCTTTAGCCTTCTTGAAA-AGATCACGAACCCGTGAGGCGCCAACACCAAC 935 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||||||||| | | | | | || | || ||||| ||| || |||||| | Sbjct 934 AAACATCTCCACAAACTCAGATCCTG-AGATAGAGAAAAAGGGAACACCAGCTTCACCAG 876 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 9911 ||||||| ||| || |||||||| || ||||| || ||| ||| || ||||| Sbjct 875 CAATGGCCTTGGCAAGTAGAGTCTTTCCAGTACCAGGAGGACCAATGAGAAGAACACCTT 816 Query 9912 GTGGAATCTTGGCGCCACTTCCAAAGT--ATCTCTCAGGTTGCTTAAGAAAATCCACAAT 9969 || | | | ||| | | ||| | || || |||| ||||||||| ||||| | Sbjct 815 TAGG--TATACGAGCCCCGACAGCAGTAAACCTTTCTGGTTTCTTAAGAAACTCCACTAC 758 Query 9970 TTC 9972 ||| Sbjct 757 TTC 755 >seq146110 Length=166024 Score = 150 bits (166), Expect = 2e-31 Identities = 130/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || ||||||||||| | |||| |||||||| || || ||||| |||||||| || | Sbjct 154876 TCATTTGCTGAGCGGATTCTCGCTTTTGCGTGCGTCGAAGGTATTTTCTTCTCCGGCAGC 154817 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 |||||||| || | |||||||||||||| ||| | |||||||||||| || || ||| Sbjct 154816 TTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAAC 154757 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| |||||||||||||||||||||||| || ||||| Sbjct 154756 GAGCTCATCTCTCGTGACGAGGGACTCCACTGCGACTTTGC 154716 >seq124605 Length=252891 Score = 98.7 bits (108), Expect = 1e-15 Identities = 246/368 (67%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9670 ||| ||||||||||| ||||| || || ||||| || ||||| | |||||||| | | Sbjct 104574 AAATCCATCCATCTCAGTCAAGAGCTGATTAATGGTCTGTTCTCTCTCATCATTACCACC 104633 Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 || | ||||| | | ||| |||| || ||||||||||| ||||| || || || Sbjct 104634 ACCAAGC--CCAGCCCCTCTCTGCCTTCCAACCGCATCAATCTCGTCAATAAAAACAATA 104691 Query 9731 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 9786 || || |||||| | || ||||| | ||||| ||| |||| || || || Sbjct 104692 CAGGG--AGCTTTCGCCTTTGCCTTCTCAAACAAATCCC--TCACCCTTGAAGCTCCAAC 104747 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 |||||||| | || ||||| | || || | ||| | |||||| ||| || || Sbjct 104748 TCCAACAAAAAGTTCAACAAACTCTGAAGCAGCACACGAAAAGAAGGGCACACCAGCCTC 104807 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 || || | || || || || || ||||| || || || ||| || | | ||| Sbjct 104808 GCCGGCGACCGCCCGAGCTAGCAGCGTCTTCCCAGTTCCCGGCGGCCCAACCAAAAGGCA 104867 Query 9907 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 |||| |||||||| || ||| | |||| | ||||| | ||| | |||||| || Sbjct 104868 ACCTTTGGGAATCTTAGCACCAAGAGCCGTGTATTTATCAGGATTCTTCAAAAAATCGAC 104927 Query 9967 AATTTCTT 9974 | ||||| Sbjct 104928 GACTTCTT 104935 Score = 98.7 bits (108), Expect = 1e-15 Identities = 246/368 (67%), Gaps = 12/368 (3%) Strand=Plus/Plus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9670 ||| ||||||||||| ||||| || || ||||| || ||||| | |||||||| | | Sbjct 153907 AAATCCATCCATCTCAGTCAAGAGCTGATTAATGGTCTGTTCTCTCTCATCATTACCACC 153966 Query 9671 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 9730 || | ||||| | | ||| |||| || ||||||||||| ||||| || || || Sbjct 153967 ACCAAGC--CCAGCCCCTCTCTGCCTTCCAACCGCATCAATCTCGTCAATAAAAACAATA 154024 Query 9731 CATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 9786 || || |||||| | || ||||| | ||||| ||| |||| || || || Sbjct 154025 CAGGG--AGCTTTCGCCTTTGCCTTCTCAAACAAATCCC--TCACCCTTGAAGCTCCAAC 154080 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 |||||||| | || ||||| | || || | ||| | |||||| ||| || || Sbjct 154081 TCCAACAAAAAGTTCAACAAACTCTGAAGCAGCACACGAAAAGAAGGGCACACCAGCCTC 154140 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 || || | || || || || || ||||| || || || ||| || | | ||| Sbjct 154141 GCCGGCGACCGCCCGAGCTAGCAGCGTCTTCCCAGTTCCCGGCGGCCCAACCAAAAGGCA 154200 Query 9907 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 |||| |||||||| || ||| | |||| | ||||| | ||| | |||||| || Sbjct 154201 ACCTTTGGGAATCTTAGCACCAAGAGCCGTGTATTTATCAGGATTCTTCAAAAAATCGAC 154260 Query 9967 AATTTCTT 9974 | ||||| Sbjct 154261 GACTTCTT 154268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582173390436760