Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq147506 87.8 6e-13 seq93847 87.8 6e-13 seq104867 80.6 9e-11 >seq147506 Length=118584 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 66915 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 66856 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 66855 CTGTCTCCGCAAC 66843 >seq93847 Length=9265 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||||||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 1724 CGGAGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 1783 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 1784 CTGTCTCCGCAAC 1796 >seq104867 Length=862580 Score = 80.6 bits (88), Expect = 9e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 21143 TTCAAGTCGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGT 21202 |||| | ||||||||||||| ||||||| || ||||||||||| |||||| | ||| Sbjct 798548 TTCAGGGCGGAGTAGAGCAGTTTGGTAGCTTGCAAGGCTCATAACCTTGAGGTCACGGGT 798607 Query 21203 TCGAATCCTGTCTCCGCAA 21221 || |||||| ||||||||| Sbjct 798608 TCAAATCCTATCTCCGCAA 798626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162236945114682