Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq146607 118 1e-21 seq146110 109 8e-19 seq122030 109 8e-19 seq39102 109 8e-19 seq37047 102 1e-16 seq148002 87.8 2e-12 >seq146607 Length=192245 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 ||| || ||||| | ||||| ||||||| |||| |||| | |||||| |||| ||| || Sbjct 47793 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 47734 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 || || |||||||| |||||| |||||||||||| | || ||||| ||| || || Sbjct 47733 ATTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 47674 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 | || |||||||| || ||| ||| | ||||| |||| |||||| || || Sbjct 47673 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATAT 47614 Query 78338 ACCCTCTATACTGTCATCCATCATG 78362 || || || || ||||| ||||| Sbjct 47613 CCCATCAATGCTATCATCTTTCATG 47589 Score = 113 bits (124), Expect = 6e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 ||| || ||||| | ||||| ||||||| |||| |||| | |||||| |||| ||| || Sbjct 52479 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 52420 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 || || |||||||| |||||| |||||||||||| | || ||||| ||| || || Sbjct 52419 ATTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 52360 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 | || |||||||| || ||| ||| | || || |||| |||||| || || Sbjct 52359 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCACACTCCTTCAGTGTATCATATAT 52300 Query 78338 ACCCTCTATACTGTCATCCATCATG 78362 || || || || ||||| ||||| Sbjct 52299 CCCATCAATGCTATCATCTTTCATG 52275 Score = 102 bits (112), Expect = 1e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 77890 ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 ||| ||||| ||| |||||| ||| || | |||| |||||||||||| |||| Sbjct 54030 ATCACCTCTTTCT--CATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAG 53973 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 |||| ||||| || |||||||| | |||||||| || ||| || |||| || Sbjct 53972 CCAAACCAGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTT 53913 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||| || ||||| || |||||||| ||| ||| ||||||| || ||||||||| || Sbjct 53912 CCATGAAAAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 53855 Score = 102 bits (112), Expect = 1e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 77890 ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 ||| ||||| ||| |||||| ||| || | |||| |||||||||||| |||| Sbjct 55612 ATCACCTCTTTCT--CATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAG 55555 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 |||| ||||| || |||||||| | |||||||| || ||| || |||| || Sbjct 55554 CCAAACCAGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTT 55495 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||| || ||||| || |||||||| ||| ||| ||||||| || ||||||||| || Sbjct 55494 CCATGAAAAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 55437 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| |||||||| || | ||| ||||| || || ||||||||| | ||| | | || Sbjct 46419 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 46360 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||||||| || || || | || || || ||||| || || || || | |||||| Sbjct 46359 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 46300 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 ||| || ||||| ||||| | ||| | | |||||| | ||| ||| || | Sbjct 46299 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 46240 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||| ||||||||||| | ||| ||| || || || || ||||| Sbjct 46239 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 46192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| |||||||| || | ||| ||||| || || ||||||||| | ||| | | || Sbjct 51486 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 51427 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||||||| || || || | || || || ||||| || || | || | |||||| Sbjct 51426 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGAAACTCTCATCAA 51367 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 ||| || ||||| ||||| | ||| | | |||||| | ||| ||| ||| | Sbjct 51366 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGTTCGAG 51307 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||| ||||||||||| | ||| ||| || || || || ||||| Sbjct 51306 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 51259 >seq146110 Length=166024 Score = 109 bits (120), Expect = 8e-19 Identities = 220/320 (69%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 |||||||| || || || || || || || | | || | ||||||||||| |||||| Sbjct 154713 CATGCAAAGTCGCAGTGGAGTCCCTCGTCACGAGAGATGAGCTCGTTAGAAAAAGTGAGA 154772 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAA 48259 || ||||| | || || || |||||||| || | || ||| ||| | || || ||||| Sbjct 154773 CCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGA-TGGCGCAGAAGCTGCCGGAGAAGAA 154831 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT-- 48317 || ||||| ||| |||||| ||| || || | ||| | || || | | | || Sbjct 154832 AATACCTTCGACGCACGCAAAAGCGAGAA-TC-CGCTCAGCAAATGATTCAGAGGCGTCA 154889 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || ||||||| | |||||| || || || | ||||| || || | Sbjct 154890 ATCCAGCGCAGTGCCCACTGAGCCTTACGGGCGACGCAGGGTACGGTTTCGATGGCGCGA 154949 Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437 || ||| | |||||| || || || | ||| || || | | |||||||||||| Sbjct 154950 AAAAGATTGGATTTTTCGGTGGAGTCCTTGATGTAGGTCTCGAGGAGAAGACTATACATC 155009 Query 48438 TCGGAGTGAATATTTTCAAT 48457 ||||||||||| ||||| || Sbjct 155010 TCGGAGTGAATGTTTTCGAT 155029 >seq122030 Length=308131 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| |||||||| ||||| || ||||| ||||| || ||||| || | |||| Sbjct 210806 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 210865 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCA 78516 ||| |||| ||| || || || || || |||| |||||| |||| || || | ||||| Sbjct 210866 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 210924 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 |||||||||| || ||||| ||| || | || ||| || | || || |||| | Sbjct 210925 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTTTCGA 210984 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||||||||||||| || | || |||||||| || ||||| || Sbjct 210985 GAGTTTTAAAACCAAAGTAATCATAATCGAAGTCTCTATCATAAATGAT 211033 >seq39102 Length=2222 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| |||||||| ||||| || ||||| ||||| || ||||| || | |||| Sbjct 645 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 586 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCA 78516 ||| |||| ||| || || || || || |||| |||||| |||| || || | ||||| Sbjct 585 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 527 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 |||||||||| || ||||| ||| || | || ||| || | || || | || | Sbjct 526 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 467 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||||||||||||| || | || ||||||||| || ||||| || Sbjct 466 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 418 >seq37047 Length=1246 Score = 102 bits (112), Expect = 1e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 77890 ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 ||| ||||| ||| |||||| ||| || | |||| |||||||||||| |||| Sbjct 1173 ATCACCTCTTTCT--CATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAG 1116 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 |||| ||||| || |||||||| | |||||||| || ||| || |||| || Sbjct 1115 CCAAACCAGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTT 1056 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||| || ||||| || |||||||| ||| ||| ||||||| || ||||||||| || Sbjct 1055 CCATGAAAAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 998 >seq148002 Length=1402447 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/269 (67%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 48450 TTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTA 48509 ||||| || || ||||||||||| || ||| | ||| || | || |||||||||| Sbjct 225420 TTTTCGATGGCGATCTGAAATCCATAGAAAGCGCGCGCCTCCGGGAGCTGTACCTCCCGC 225361 Query 48510 CAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAAT 48569 || || |||| | ||||| || ||||| || ||| || || || || | Sbjct 225360 ATGAAGCGGCCAGCGAGGTTCTCTAGAACGATTCCGTCGGAAGCGGCGAAGAAAGCGAGA 225301 Query 48570 ACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG---TTTATTCCAGTCATTGATATCT 48626 || || | | |||| ||||| ||| || || || |||||||| || |||| Sbjct 225300 ACGTGGGTTACGAAATGCCGTTCGTCGGAGGTGAGGGATTCATTCCAGTGGCGGAGATCT 225241 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 | || | ||| |||||||| |||||||| || || || || ||||| || ||||| | | Sbjct 225240 TGGGACAGATCAACTTCTTCTGCTGTCCAGAAAGAGGCTTCGGCTTTCTTGTACATCTCC 225181 Query 48687 CATATATCACTGTATTGGATTGGGAAAAT 48715 || || | | ||| |||| || || || Sbjct 225180 CAGATCTGAGGGTAGCGGATCGGAAACAT 225152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693373685539360