Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq146607 113 6e-20 seq122030 109 8e-19 seq39102 109 8e-19 seq37047 93.3 6e-14 >seq146607 Length=192245 Score = 113 bits (124), Expect = 6e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| || ||||| | ||||| || |||| |||| |||| | |||||| |||| |||||| Sbjct 52479 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 52420 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || || || ||||| |||||| |||||||||||| |||||||| ||| || ||| Sbjct 52419 ATTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 52360 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || |||||||| || || || | ||||| |||| ||| ||||| || Sbjct 52359 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCACACTCCTTCAGTGTATCATATAT 52300 Query 76933 GCCCTCTATACTATCATCCATCATG 76957 || || || |||||||| ||||| Sbjct 52299 CCCATCAATGCTATCATCTTTCATG 52275 Score = 109 bits (120), Expect = 8e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| || ||||| | ||||| || |||| |||| |||| | |||||| |||| |||||| Sbjct 47793 ACCCCCTTGATCAACATATCGAGCGGTGTCATTAAAAACACGCAACATGGGAACAATGCC 47734 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || || || ||||| |||||| |||||||||||| |||||||| ||| || ||| Sbjct 47733 ATTCGACGTTCCATTCGTTCCACGAATATAACTTCCGGTGGCACGAATGTTATGAACAGA 47674 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || |||||||| || || || | || || |||| ||| ||||| || Sbjct 47673 GACACCAATTCCTCCAGCAGACTTGCTTATAACTGCGCACTCCTTCAGTGTATCATATAT 47614 Query 76933 GCCCTCTATACTATCATCCATCATG 76957 || || || |||||||| ||||| Sbjct 47613 CCCATCAATGCTATCATCTTTCATG 47589 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||| | ||||||| | ||| | | |||| |||||||||||| |||| ||||||| Sbjct 54025 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 53966 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 |||| || || || || | |||||||| || ||| || || | || ||| || Sbjct 53965 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 53906 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 ||||| || |||||||| ||| ||| ||||||| || |||| |||| || Sbjct 53905 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 53855 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||| | ||||||| | ||| | | |||| |||||||||||| |||| ||||||| Sbjct 55607 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 55548 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 |||| || || || || | |||||||| || ||| || || | || ||| || Sbjct 55547 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 55488 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 ||||| || |||||||| ||| ||| ||||||| || |||| |||| || Sbjct 55487 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 55437 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| |||||||| |||| ||||||||| || ||||| |||||| | ||| | | || Sbjct 46419 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 46360 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| || | | | ||||| || ||||| || ||||| || | |||||| Sbjct 46359 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGCAACTCTCATCAA 46300 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| || ||||| | ||| | ||| | | |||||| | ||| ||| || | Sbjct 46299 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGCTCGAG 46240 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| ||||||||||| | ||| ||| || || || || ||||| Sbjct 46239 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 46192 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| |||||||| |||| ||||||||| || ||||| |||||| | ||| | | || Sbjct 51486 AGTGCCTGCATTGAACAGTGTAGGAGAAGCGTGAGTAAACCATCGCTGAGACATCAAATG 51427 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||||||| || | | | ||||| || ||||| || |||| || | |||||| Sbjct 51426 GTATGTTCTGATTGCAGACACAATATCATCTTTGTGAATCCCAACAGAAACTCTCATCAA 51367 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 ||| || ||||| | ||| | ||| | | |||||| | ||| ||| ||| | Sbjct 51366 CATGTGTTGAGGCCTTTCGATGACCTTCCCAGAAACTTTCAAGAGGTAGGATCGTTCGAG 51307 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| ||||||||||| | ||| ||| || || || || ||||| Sbjct 51306 GGTTTTGAAACCAAAATAATCGTAGTCAAAATCCCTGTCATATATAAT 51259 >seq122030 Length=308131 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| |||||||| || || |||||||| |||||||||||||| || | |||| Sbjct 210806 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 210865 Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111 ||| |||| ||| | | || ||||| |||| |||||| |||| ||| || | ||||| Sbjct 210866 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 210924 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 |||||||||| || | ||| || || | || ||| || | || || |||| | Sbjct 210925 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTTTCGA 210984 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||||||||||||| || | || |||||||| || ||||| || Sbjct 210985 GAGTTTTAAAACCAAAGTAATCATAATCGAAGTCTCTATCATAAATGAT 211033 >seq39102 Length=2222 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| |||||||| || || |||||||| |||||||||||||| || | |||| Sbjct 645 AGTGCCTGCATTGAATAAGGTAGGAGAAGCATGAGTGAACCACCGCAGTGACATCAGATG 586 Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111 ||| |||| ||| | | || ||||| |||| |||||| |||| ||| || | ||||| Sbjct 585 GTAGGTTTTAATGGCAGAATCAATATCTTCATT-ATGAATCCCTATAGCAACTCTCATCA 527 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 |||||||||| || | ||| || || | || ||| || | || || | || | Sbjct 526 ACATATGCTGCGGCCTTTCCACCACTTTCCCAGATACTTTTAAAAGATAAGACCTCTCGA 467 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||||||||||||| || | || ||||||||| || ||||| || Sbjct 466 GAGTTTTAAAACCAAAGTAATCATAATCAAAGTCTCTATCATAAATGAT 418 >seq37047 Length=1246 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||| | ||||||| | ||| | | |||| |||||||||||| |||| ||||||| Sbjct 1168 CTCTTTCTCATATTTTAGATACAGTCTCACAAACTCATCTCCCCAACAATCAGCCAAACC 1109 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 |||| || || || || | |||||||| || ||| || || | || ||| || Sbjct 1108 AGGAGCCTCGTTTGGGCAGAATAATGACCATTCCTCATTACTCTGGACTCTTTCCATGAA 1049 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 ||||| || |||||||| ||| ||| ||||||| || |||| |||| || Sbjct 1048 AAGATCGGGAATCCATAGGGCATAAAAAAGATCTCTGGCTCTATGTTCCTC 998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711605231839680